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SCNpilot_cont_1000_p_scaffold_3694_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3694_curated_1
unknown

Not on your lists

2..868
DNA (867bp) protein (289aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_curated_2
unknown

Not on your lists

937..1176
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_curated_3
RifOxyA12_full_Elusimicrobia_57_11_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1202..2029)
DNA (828bp) protein (276aa)
Putative uncharacterized protein id=2162486 bin=GWE2_Gallionellales_58_10 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Tax=RifOxyA12_full_Elusimicrobia_57_11_curated
SCNpilot_cont_1000_p_scaffold_3694_curated_4
unknown

Not on your lists

2092..2718
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_curated_5
unknown

Not on your lists

2743..2835
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_curated_6
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3210..4436)
DNA (1227bp) protein (409aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D524_9BACT
DEAD/DEAH box helicase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3694_curated_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5092..5565)
DNA (474bp) protein (158aa)
ferritin n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174491A
ferritin Dps family protein; K04047 starvation-inducible DNA-binding protein
Ferritin Dps family protein {ECO:0000313|EMBL:ACB77830.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_3694_curated_8
Pseudoalteromonas spongiae, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5650..5853
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1M324_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG51797.1}; TaxID=1117319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas spongiae UST010723-006.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3694_curated_9
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

5887..6369
DNA (483bp) protein (161aa)
Hypothetical membrane protein id=2618904 bin=GWA2_Bacteroidetes_42_15 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_13_Chloroflexi_66_10_curated
SCNpilot_cont_1000_p_scaffold_3694_curated_10
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6509..6883
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003770010
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJR36160.1}; TaxID=670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio parahaemolyticus.;"
SCNpilot_cont_1000_p_scaffold_3694_curated_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6966..8351
DNA (1386bp) protein (462aa)
Nucleoside recognition domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D368_9BACT
Nucleoside recognition domain protein {ECO:0000313|EMBL:EDY19179.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
nucleoside recognition domain protein
SCNpilot_cont_1000_p_scaffold_3694_curated_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8360..9313
DNA (954bp) protein (318aa)
Auxin Efflux Carrier n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ09_9BACT
Auxin Efflux Carrier {ECO:0000313|EMBL:EDY20700.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
auxin efflux carrier; K07088
SCNpilot_cont_1000_p_scaffold_3694_curated_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(9310..10011)
DNA (702bp) protein (234aa)
4'-phosphopantetheinyl transferase n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V7F7_9CYAN
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:KIF28827.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
4'-phosphopantetheinyl transferase
SCNpilot_cont_1000_p_scaffold_3694_curated_14
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

10071..10460
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DZQ3_METI4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD84238.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
SCNpilot_cont_1000_p_scaffold_3694_curated_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10481..11293)
DNA (813bp) protein (271aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6A4_9BACT
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EDY18013.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cof; HAD superfamily hydrolase; K07024
SCNpilot_cont_1000_p_scaffold_3694_curated_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11398..11670
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59837.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_1000_p_scaffold_3694_curated_17

Not on your lists

12012..12491
DNA (480bp) protein (160aa)
Putative Histidinol-phosphatase {ECO:0000313|EMBL:CBH75449.1}; EC=3.1.3.15 {ECO:0000313|EMBL:CBH75449.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative Histidinol-phosphatase n=1 Tax=mine drainage metagenome RepID=E6PG61_9ZZZZ
tRNA nucleotidyltransferase/poly(A) polymerase family protein
SCNpilot_cont_1000_p_scaffold_3694_curated_18
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(12551..13108)
DNA (558bp) protein (186aa)
LemA-like protein n=1 Tax=uncultured bacterium RepID=K2FU20_9BACT
LemA family protein; K03744 LemA protein
Tax=RBG_13_Planctomycetes_60_9_curated
SCNpilot_cont_1000_p_scaffold_3694_curated_19
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(13105..13788)
DNA (684bp) protein (228aa)
Putative uncharacterized protein id=4312365 bin=GWF2_Planctomycetes_50_10 species=Kribbella flavida genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_13_Planctomycetes_44_8b_curated
SCNpilot_cont_1000_p_scaffold_3694_curated_20
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14524..15387)
DNA (864bp) protein (288aa)
Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus (strain HTA426) RepID=Q5L3N8_GEOKA
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:BAD74442.1}; TaxID=235909 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus kaustophilus (strain HTA426).;"
SCNpilot_cont_1000_p_scaffold_3694_curated_21
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(15377..16633)
DNA (1257bp) protein (419aa)
Integrase, catalytic region n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NXL4_9DELT
integrase catalytic subunit
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
SCNpilot_cont_1000_p_scaffold_3694_curated_22
unknown

Not on your lists

comp(16714..17265)
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_curated_23
unknown

Not on your lists

18096..18641
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037FA716
SCNpilot_cont_1000_p_scaffold_3694_curated_24
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

Not on your lists

comp(18810..19223)
DNA (414bp) protein (138aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=2 Tax=Marinobacter RepID=A1TX84_MARAV
Two component system sensor histidine kinase, hybrid {ECO:0000313|EMBL:KJJ85991.1}; TaxID=1609969 species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
SCNpilot_cont_1000_p_scaffold_3694_curated_25
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(19235..19753)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K0U2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIE58919.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3694_curated_26
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19765..20040)
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU65_9BACT
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3694_curated_27
unknown

Not on your lists

comp(20285..20662)
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_curated_28
unknown

Not on your lists

comp(20794..21225)
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_curated_29
unknown

Not on your lists

21555..22016
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3694_curated_30
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22030..23337
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A0R835_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL01254.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
Displaying items 1-30 of 40 in total

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