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SCNpilot_cont_1000_p_scaffold_5007_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_5007_curated_1
unknown

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comp(3..290)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5007_curated_2
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(287..1258)
DNA (972bp) protein (324aa)
Short chain dehydrogenase/reductase family oxidoreductase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CDG3_MYXFH
short chain dehydrogenase/reductase family oxidoreductase
Short chain dehydrogenase/reductase family oxidoreductase {ECO:0000313|EMBL:AEI67270.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCNpilot_cont_1000_p_scaffold_5007_curated_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1255..2388)
DNA (1134bp) protein (378aa)
Uncharacterized protein id=4674739 bin=GWA2_Ignavibacteriae_55_25 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_5007_curated_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2407..3726)
DNA (1320bp) protein (440aa)
glyA1; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=2818038 bin=GWA1_Deltaproteobacteria_52_35 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_5007_curated_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3868..4335)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XQ95_SORCE
hypothetical protein
Hypothetical membrane protein predicted by Glimmer/Critica {ECO:0000313|EMBL:CAN91525.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_1000_p_scaffold_5007_curated_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4393..5010)
DNA (618bp) protein (206aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZR0_SOLUE
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABJ84855.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_1000_p_scaffold_5007_curated_7
unknown

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comp(5242..5877)
DNA (636bp) protein (212aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_5007_curated_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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5996..6421
DNA (426bp) protein (142aa)
Ferric uptake regulator, Fur family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D291_9BACT
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:EDY19331.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Fur family ferric uptake regulator; K09825 Fur family transcriptional regulator, peroxide stress response regulator
SCNpilot_cont_1000_p_scaffold_5007_curated_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6431..7186
DNA (756bp) protein (252aa)
FeS assembly ATPase SufC n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFJ2_9BACT
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_5007_curated_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7217..8332
DNA (1116bp) protein (372aa)
FeS assembly protein SufB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D293_9BACT
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Displaying 10 items

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