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SCNpilot_cont_1000_p_scaffold_6429_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_6429_curated_1
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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3..725
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXG4_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB76959.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_6429_curated_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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722..1339
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00035CE0C4
Uncharacterized protein {ECO:0000313|EMBL:EDY16329.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein; K09778 hypothetical protein
SCNpilot_cont_1000_p_scaffold_6429_curated_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1344..2222
DNA (879bp) protein (293aa)
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745AEA
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_6429_curated_4
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2229..2942
DNA (714bp) protein (238aa)
Cell wall-associated hydrolase, invasion-associated protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TKC5_9CYAN
cell wall-associated hydrolase
Cell wall-associated hydrolase, invasion-associated protein {ECO:0000313|EMBL:AFY82606.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
SCNpilot_cont_1000_p_scaffold_6429_curated_5

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comp(2943..3401)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037A9990
Uncharacterized protein {ECO:0000313|EMBL:KKN66667.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
manganese transport regulator MntR; K11924 DtxR family transcriptional regulator, manganese transport regulator
SCNpilot_cont_1000_p_scaffold_6429_curated_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3455..4201)
DNA (747bp) protein (249aa)
acid phosphatase (EC:3.1.3.2); K09474 acid phosphatase (class A) [EC:3.1.3.2]
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCN7_9BACT
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EEF62233.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_1000_p_scaffold_6429_curated_7
unknown

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4304..4684
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_6429_curated_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4762..5016)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CY99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY21247.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_6429_curated_9
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5125..6348
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2ULS1_AKKM8
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_6429_curated_10

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comp(6335..6787)
DNA (453bp) protein (151aa)
Glycosyl transferase family 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL4_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48652.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
arnC; UDP-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Displaying 10 items

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