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SCNpilot_cont_1000_p_scaffold_2531_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2531_curated_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3..1121
DNA (1119bp) protein (373aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Trigger factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C3_9BACT
tig; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); K03545 trigger factor
SCNpilot_cont_1000_p_scaffold_2531_curated_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1127..1756
DNA (630bp) protein (210aa)
endopeptidase Clp (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
Clp protease proteolytic subunit ClpP n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745C29
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_2531_curated_3

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1768..3042
DNA (1275bp) protein (425aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1C5_9BACT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
clpX; ATP-dependent Clp protease ATP-binding subunit clpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
SCNpilot_cont_1000_p_scaffold_2531_curated_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3060..4301
DNA (1242bp) protein (414aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F7_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY18066.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
group 1 glycosyl transferase
SCNpilot_cont_1000_p_scaffold_2531_curated_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4298..4858
DNA (561bp) protein (187aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU06_9BACT
SCNpilot_cont_1000_p_scaffold_2531_curated_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4855..6021)
DNA (1167bp) protein (389aa)
Glycosyl transferase group 1 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F8_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EDY18067.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
group 1 glycosyl transferase
SCNpilot_cont_1000_p_scaffold_2531_curated_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6133..6732
DNA (600bp) protein (200aa)
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWR9_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_2531_curated_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6733..8022)
DNA (1290bp) protein (430aa)
sulfatase (EC:3.1.6.6); K01133 choline-sulfatase [EC:3.1.6.6]
Choline-sulfatase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K792_9FIRM
Choline-sulfatase {ECO:0000313|EMBL:EGN41687.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
SCNpilot_cont_1000_p_scaffold_2531_curated_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8023..8949)
DNA (927bp) protein (309aa)
Adenylate/guanylate cyclase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5D5_9BACT
Adenylate/guanylate cyclase {ECO:0000313|EMBL:EDY18340.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
family 3 adenylate cyclase
SCNpilot_cont_1000_p_scaffold_2531_curated_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(8981..9577)
DNA (597bp) protein (199aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAG3_9BACT
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EDY16624.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2531_curated_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9681..10358
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D547_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18252.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_2531_curated_12
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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10400..11023
DNA (624bp) protein (208aa)
Lipolytic protein G-D-S-L family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IYB3_9BACT
GDSL family lipase {ECO:0000313|EMBL:AHF89081.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
G-D-S-L family lipolytic protein
SCNpilot_cont_1000_p_scaffold_2531_curated_13
unknown

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comp(11024..11566)
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2531_curated_14
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11573..13513)
DNA (1941bp) protein (647aa)
type II secretory protein GspE n=2 Tax=unclassified candidate division EM 19 RepID=UPI0003B7AF79
outE; General secretion pathway protein E (Type II traffic warden ATPase) (Cholera toxin secretion protein EpsE); K02454 general secretion pathway protein E
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
SCNpilot_cont_1000_p_scaffold_2531_curated_15
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(13742..14104)
DNA (363bp) protein (121aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SKW8_9CYAN
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AFY70454.1}; Flags: Precursor;; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
Displaying 15 items

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