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SCNpilot_cont_1000_p_scaffold_3298_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3298_curated_1
unknown

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comp(1..192)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3298_curated_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(189..1787)
DNA (1599bp) protein (533aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EDY16994.1}; EC=1.1.1.95 {ECO:0000313|EMBL:EDY16994.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-3-phosphoglycerate dehydrogenase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D991_9BACT
SCNpilot_cont_1000_p_scaffold_3298_curated_3
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1896..2852)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7YZR0_BDEBC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY03243.1}; TaxID=1069642 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus str. Tiberius.;"
SCNpilot_cont_1000_p_scaffold_3298_curated_4
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2836..3207)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MH88_BDEBA
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHD87854.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3298_curated_5
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3363..4436
DNA (1074bp) protein (358aa)
protease n=1 Tax=Sinorhizobium medicae RepID=UPI000372AC22
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ABR63705.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_1000_p_scaffold_3298_curated_6
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4567..5433
DNA (867bp) protein (289aa)
ATP synthase F0 subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase F0, A subunit n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174658A
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3298_curated_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5506..5751
DNA (246bp) protein (82aa)
H+transporting two-sector ATPase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174658B
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3298_curated_8
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5815..6324
DNA (510bp) protein (170aa)
atpF; F0F1-type ATP synthase subunit b; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Pedosphaera parvula Ellin514 PF1_9BACT">RepID=B9XPF1_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3298_curated_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

6330..6722
DNA (393bp) protein (131aa)
atpH; F0F1-type ATP synthase subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F2_9BACT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_3298_curated_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6735..8270
DNA (1536bp) protein (512aa)
atpA; F0F1-type ATP synthase subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F1_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3298_curated_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8277..9146
DNA (870bp) protein (290aa)
ATP synthase F1 subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6F0_9BACT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_3298_curated_12
unknown

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comp(9097..9330)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3298_curated_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9682..10374
DNA (693bp) protein (231aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
atpD; F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6E9_9BACT
SCNpilot_cont_1000_p_scaffold_3298_curated_14
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10448..10858
DNA (411bp) protein (137aa)
atpC; F0F1-type ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase epsilon chain n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPE6_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3298_curated_15
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10955..11578
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Z4_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_3298_curated_16
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11928..12503
DNA (576bp) protein (192aa)
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_1000_p_scaffold_3298_curated_17
unknown

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12833..13195
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3298_curated_18
unknown

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13347..13535
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 18 items

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