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SCNpilot_cont_1000_p_scaffold_7215_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_7215_curated_1
unknown

Not on your lists

370..576
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_2
unknown

Not on your lists

741..1076
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_3
unknown

Not on your lists

1118..1672
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2087..2806
DNA (720bp) protein (240aa)
Putative two-component response regulator n=2 Tax=Rhizobium meliloti RepID=M4MMQ1_RHIML
Uncharacterized protein {ECO:0000313|EMBL:KGM35893.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
two-component response regulator protein; K02477 two-component system, LytT family, response regulator
SCNpilot_cont_1000_p_scaffold_7215_curated_5
unknown

Not on your lists

3024..3401
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_6
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3734..5545)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QN23_GLANF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP31442.1}; TaxID=1085623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064).;"
SCNpilot_cont_1000_p_scaffold_7215_curated_7
unknown

Not on your lists

6186..6389
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_8
unknown

Not on your lists

6535..7140
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_9
unknown

Not on your lists

7283..7738
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_10
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8087..8344)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1UGG4_9ZZZZ
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_cont_1000_p_scaffold_7215_curated_11
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8328..8561)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000370B2CC
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_cont_1000_p_scaffold_7215_curated_12
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8704..9402)
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNV1_SYNFM
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABK19103.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
SCNpilot_cont_1000_p_scaffold_7215_curated_13
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

9646..10647
DNA (1002bp) protein (334aa)
Polysaccharide deacetylase id=4224799 bin=GWF2_Lentisphaerae_50_93 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
SCNpilot_cont_1000_p_scaffold_7215_curated_14
unknown

Not on your lists

comp(10835..11347)
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_15
unknown

Not on your lists

comp(11350..11628)
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_16
unknown

Not on your lists

12152..12307
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_17
unknown

Not on your lists

comp(12447..12608)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_18
unknown

Not on your lists

comp(12671..13009)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_19
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13205..14053)
DNA (849bp) protein (283aa)
Mrr restriction endonuclease; K07448 restriction system protein id=12497776 bin=THIO_MID species=Brevibacillus brevis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=THIO_MID organism_group=Betaproteobacteria
Restriction endonuclease {ECO:0000313|EMBL:GAO36290.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
restriction endonuclease
SCNpilot_cont_1000_p_scaffold_7215_curated_20
unknown

Not on your lists

comp(14248..14568)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_21
unknown

Not on your lists

comp(14617..15675)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744347
SCNpilot_cont_1000_p_scaffold_7215_curated_22
unknown

Not on your lists

comp(15919..16203)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_7215_curated_23
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16319..17605)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI00035DF700
transcriptional regulator with HTH domain
Tax=RBG_16_Gammaproteobacteria_51_14_curated
Displaying 23 items

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