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SCNpilot_cont_1000_p_scaffold_792_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_792_curated_1
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

2..409
DNA (408bp) protein (136aa)
ATPase AAA-2 domain protein id=3857560 bin=GWF2_Lentisphaerae_49_21 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC
Tax=GWF2_Lentisphaerae_49_21_curated
SCNpilot_cont_1000_p_scaffold_792_curated_2
BJP_08E140C01_Elusimicrobia_64_11, Elusimicrobia lineage IV, Elusimicrobia, Bacteria

Not on your lists

comp(428..703)
DNA (276bp) protein (92aa)
Permease id=1725385 bin=GWB2_Elusimicrobia_63_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
permease
Tax=BJP_08E140C01_Elusimicrobia_64_11
SCNpilot_cont_1000_p_scaffold_792_curated_3
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(726..1001)
DNA (276bp) protein (92aa)
arsenic resistance protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003697A93
Arsenite efflux pump ACR3 and related permease {ECO:0000313|EMBL:BAO82295.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
bile acid:sodium symporter
SCNpilot_cont_1000_p_scaffold_792_curated_4
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1253..1594
DNA (342bp) protein (114aa)
Copper chaperone n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z803_BELBD
copper chaperone
Copper chaperone {ECO:0000313|EMBL:AFL85371.1}; Flags: Precursor;; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
SCNpilot_cont_1000_p_scaffold_792_curated_5
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1591..2277
DNA (687bp) protein (229aa)
thiol:disulfide interchange protein id=12556459 bin=CNBR_ACIDO species=Nafulsella turpanensis genus=Nafulsella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:AII54459.1}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
thiol:disulfide interchange protein
SCNpilot_cont_1000_p_scaffold_792_curated_6
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2361..4754
DNA (2394bp) protein (798aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002DC19AB
copper/silver-translocating P-type ATPase
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AFL85370.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
SCNpilot_cont_1000_p_scaffold_792_curated_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

4761..5219
DNA (459bp) protein (153aa)
hmrR; heavy metal resistance transcriptional regulator HmrR id=12556486 bin=CNBR_ACIDO species=Ornithinimicrobium pekingense genus=Ornithinimicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcription regulator MerR DNA binding protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_cont_1000_p_scaffold_792_curated_8
unknown

Not on your lists

5257..5400
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_792_curated_9
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(5370..5600)
DNA (231bp) protein (77aa)
cobalt-zinc-cadmium resistance protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174613A
cation diffusion facilitator family transporter
Tax=GWA2_WOR_2_47_8_curated
SCNpilot_cont_1000_p_scaffold_792_curated_10
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(5780..6244)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPX1_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77692.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_792_curated_11
unknown

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comp(6360..6623)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_792_curated_12
uncultured Acidobacteria bacterium A11, Acidobacteria, Bacteria

Not on your lists

comp(6745..7584)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTJ6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEH26507.1}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;"
SCNpilot_cont_1000_p_scaffold_792_curated_13
Simkania negevensis, Simkania, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7756..9198)
DNA (1443bp) protein (481aa)
merA; mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1]
Mercuric reductase {ECO:0000313|EMBL:CCB87802.1}; EC=1.16.1.1 {ECO:0000313|EMBL:CCB87802.1};; TaxID=331113 species="Bacteria; Chlamydiae; Chlamydiales; Simkaniaceae; Simkania.;" source="Simkania negevensis (strain ATCC VR-1471 / Z).;"
Mercuric reductase n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L2V6_SIMNZ
SCNpilot_cont_1000_p_scaffold_792_curated_14
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(9195..9839)
DNA (645bp) protein (215aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003474B23
Tax=CG_Elusi_04
SCNpilot_cont_1000_p_scaffold_792_curated_15
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

9902..10309
DNA (408bp) protein (136aa)
Transcriptional regulator, MerR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPI5_OPITP
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACB74504.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_792_curated_16
uncultured Acidobacteria bacterium A11, Acidobacteria, Bacteria

Not on your lists

comp(10336..10917)
DNA (582bp) protein (194aa)
RNA polymerase sigma factor n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK1_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_792_curated_17
unknown

Not on your lists

comp(10914..11165)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_792_curated_18
unknown

Not on your lists

comp(11713..11964)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_792_curated_19
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(12094..13923)
DNA (1830bp) protein (610aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPY2_OPITP
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ACB77703.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_792_curated_20
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13878..15152)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003182DE4
coenzyme f390 synthetase
Coenzyme F390 synthetase-like protein {ECO:0000313|EMBL:ABG61192.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_1000_p_scaffold_792_curated_21
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15207..15611
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003609209
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGG81903.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
Transcriptional repressor smtB
SCNpilot_cont_1000_p_scaffold_792_curated_22
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

15731..17812
DNA (2082bp) protein (694aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZQ03_OPITP
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACB77722.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_792_curated_23
Lactobacillus kisonensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17787..18026
DNA (240bp) protein (80aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=797516 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus kisonensis F0435.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase id=4301587 bin=GWF2_Lentisphaerae_52_8 species=Oceanobacillus iheyensis genus=Oceanobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
SCNpilot_cont_1000_p_scaffold_792_curated_24
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

18449..19399
DNA (951bp) protein (317aa)
Signal transduction histidine kinase, LytS n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNG7_OPITP
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACB74401.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_792_curated_25
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

19396..20127
DNA (732bp) protein (244aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNG8_OPITP
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACB74402.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_792_curated_26
unknown

Not on your lists

20220..20588
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_792_curated_27
unknown

Not on your lists

20585..20833
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_792_curated_28
unknown

Not on your lists

20833..21156
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_792_curated_29
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

21143..23845
DNA (2703bp) protein (901aa)
Putative uncharacterized protein id=3807389 bin=GWF2_Lentisphaerae_49_21 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
SCNpilot_cont_1000_p_scaffold_792_curated_30
unknown

Not on your lists

23850..24158
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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