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SCNpilot_cont_1000_p_scaffold_889_curated

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_889_curated_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2..748)
DNA (747bp) protein (249aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D909_9BACT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EDY17054.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RND family efflux transporter MFP subunit
SCNpilot_cont_1000_p_scaffold_889_curated_2

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comp(745..1149)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00038102AD
Uncharacterized protein {ECO:0000313|EMBL:KKL82782.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_889_curated_3
unknown

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1442..1780
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_4
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

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comp(2041..4512)
DNA (2472bp) protein (824aa)
beta-mannosidase; K01192 beta-mannosidase [EC:3.2.1.25] id=17117424 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
glycoside hydrolase; K01192 beta-mannosidase [EC:3.2.1.25]
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
SCNpilot_cont_1000_p_scaffold_889_curated_5
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4594..5376
DNA (783bp) protein (261aa)
Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMW9_9BACT
Transcriptional regulator, AraC family protein {ECO:0000313|EMBL:EDY83164.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
putative AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_889_curated_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5631..7304
DNA (1674bp) protein (558aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVI8_9BACT
multi-sensor signal transduction multi-kinase
SCNpilot_cont_1000_p_scaffold_889_curated_7
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

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7291..7743
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D38BDA
response regulator receiver protein
Tax=RBG_16_Planctomycetes_59_8_curated
SCNpilot_cont_1000_p_scaffold_889_curated_8
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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7745..9769
DNA (2025bp) protein (675aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SQ14_9CYAN
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AFY71899.1}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
SCNpilot_cont_1000_p_scaffold_889_curated_9
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9842..10660
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2U6_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL60955.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
SCNpilot_cont_1000_p_scaffold_889_curated_10
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(10667..11782)
DNA (1116bp) protein (372aa)
Endoribonuclease L-PSP n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IX66_9BACT
Translation initiation inhibitor {ECO:0000313|EMBL:AHF89306.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
endoribonuclease L-PSP
SCNpilot_cont_1000_p_scaffold_889_curated_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12439..15573
DNA (3135bp) protein (1045aa)
rpfC; sensory transduction histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] rbh
PAS domain S-box {ECO:0000313|EMBL:BAP54628.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
PAS/PAC sensor hybrid histidine kinase id=3276365 bin=GWF2_Lentisphaerae_57_35 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
SCNpilot_cont_1000_p_scaffold_889_curated_12
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15638..17200
DNA (1563bp) protein (521aa)
Site-specific recombinase n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T2W2_JANMA
site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:ABR91621.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
SCNpilot_cont_1000_p_scaffold_889_curated_13
unknown

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17318..17818
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000381ABF7
SCNpilot_cont_1000_p_scaffold_889_curated_14
unknown

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comp(17815..18444)
DNA (630bp) protein (210aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_15
unknown

Not on your lists

18661..19179
DNA (519bp) protein (173aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_16
unknown

Not on your lists

comp(19415..20758)
DNA (1344bp) protein (448aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_17
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

21311..21691
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K0U2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIE58919.1}; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
SCNpilot_cont_1000_p_scaffold_889_curated_18
unknown

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comp(21875..22375)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_19
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

22435..23664
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000365D290
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_cont_1000_p_scaffold_889_curated_20
unknown

Not on your lists

23661..24221
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_21
unknown

Not on your lists

24263..24574
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_22
unknown

Not on your lists

24577..24768
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_23
unknown

Not on your lists

25924..26391
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_24
unknown

Not on your lists

26432..26770
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_25
unknown

Not on your lists

26789..26941
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_26
unknown

Not on your lists

26938..27099
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

27182..29215
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00037564FD
Uncharacterized protein {ECO:0000313|EMBL:EDY20190.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_889_curated_28
unknown

Not on your lists

29218..29601
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_29
unknown

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29598..30089
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_889_curated_30
unknown

Not on your lists

30068..30562
DNA (495bp) protein (165aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

View Taxonomy