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SCNpilot_cont_1000_p_scaffold_1625_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_1625_curated_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2..1414)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D833_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17387.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1625_curated_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1411..2454)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744C4C
Uncharacterized protein {ECO:0000313|EMBL:EDY17366.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1625_curated_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(2461..3009)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017462C8
Uncharacterized protein {ECO:0000313|EMBL:EDY17367.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_1625_curated_4
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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3288..4409
DNA (1122bp) protein (374aa)
Transcriptional regulator, GntR family with LacI sensor n=2 Tax=unclassified Opitutaceae RepID=H1IPI6_9BACT
Transcriptional regulator {ECO:0000313|EMBL:EIP97115.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_1625_curated_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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4469..6355
DNA (1887bp) protein (629aa)
Autotransporter-associated beta strand repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB18_9BACT
Autotransporter-associated beta strand repeat protein {ECO:0000313|EMBL:EDY16392.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
outer membrane autotransporter barrel protein
SCNpilot_cont_1000_p_scaffold_1625_curated_6
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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6367..6936
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IPI8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHF92037.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_1625_curated_7
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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6998..8974
DNA (1977bp) protein (659aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IPJ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHF92036.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_1625_curated_8
Paenibacillus sp. FSL R7-277, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8994..11495
DNA (2502bp) protein (834aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI00036B788A
Glycoside hydrolase family protein {ECO:0000313|EMBL:ETT72902.1}; TaxID=1227352 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-277.;"
glycoside hydrolase family protein
SCNpilot_cont_1000_p_scaffold_1625_curated_9
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

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11553..11801
DNA (249bp) protein (83aa)
Putative uncharacterized protein id=3831753 bin=GWF2_Lentisphaerae_49_21 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
glycosylase
Tax=GWF1_Spirochaetes_41_5_curated
SCNpilot_cont_1000_p_scaffold_1625_curated_10
unknown

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11767..12009
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1625_curated_11
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(12096..12878)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B057_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIQ00649.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
5-keto-D-gluconate-5-reductase
SCNpilot_cont_1000_p_scaffold_1625_curated_12
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(12881..14053)
DNA (1173bp) protein (391aa)
mandelate racemase/muconate lactonizing protein; K01684 galactonate dehydratase [EC:4.2.1.6]
Galactonate dehydratase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1ILV7_9BACT
Mandelate racemase {ECO:0000313|EMBL:AHF92634.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_cont_1000_p_scaffold_1625_curated_13
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

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comp(14050..14745)
DNA (696bp) protein (232aa)
Beta-lactamase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y088_PEDHD
beta-lactamase domain-containing protein
Tax=GWF2_Lentisphaerae_44_16_curated
SCNpilot_cont_1000_p_scaffold_1625_curated_14
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

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comp(14751..16916)
DNA (2166bp) protein (722aa)
glycoside hydrolase family protein; K12308 beta-galactosidase [EC:3.2.1.23]
Beta-galactosidase-like protein id=3347259 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_45_14_curated
SCNpilot_cont_1000_p_scaffold_1625_curated_15
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(17008..18129)
DNA (1122bp) protein (374aa)
Transcriptional regulator, LacI family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRZ3_OPITP
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACB74669.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_1625_curated_16
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

18228..18965
DNA (738bp) protein (246aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AWP3_9BACT
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIP99434.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_1000_p_scaffold_1625_curated_17
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

18985..21861
DNA (2877bp) protein (959aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AWP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIP99433.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
SCNpilot_cont_1000_p_scaffold_1625_curated_18
unknown

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21858..22640
DNA (783bp) protein (261aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1625_curated_19
unknown

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22767..23585
DNA (819bp) protein (273aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_1625_curated_20
unknown

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23610..24104
DNA (495bp) protein (165aa)

This feature has no annotations

Displaying 20 items

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