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SCNpilot_cont_1000_p_scaffold_4217_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4217_curated_1
unknown

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3..119
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4217_curated_2
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(148..546)
DNA (399bp) protein (133aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EH63_THECK
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AGA59603.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
SCNpilot_cont_1000_p_scaffold_4217_curated_3
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(618..917)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744402
Uncharacterized protein {ECO:0000313|EMBL:EIC23506.1}; Flags: Precursor;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4217_curated_4
unknown

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comp(1258..1479)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4217_curated_5
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1483..1887)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q3I4_METSZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL59587.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_1000_p_scaffold_4217_curated_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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1987..2919
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037094F6
hypothetical protein; K15270 S-adenosylmethionine uptake transporter
Tax=CSP1_2_Dadabacteria
SCNpilot_cont_1000_p_scaffold_4217_curated_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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2916..3830
DNA (915bp) protein (305aa)
gluconolactonase (EC:3.1.1.17)
SMP-30/Gluconolaconase/LRE domain-containing protein id=14425238 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
SCNpilot_cont_1000_p_scaffold_4217_curated_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3827..5611)
DNA (1785bp) protein (595aa)
Pseudouridine synthase, RluA family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHZ1_9BACT
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EEF60484.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
RluA family pseudouridine synthase
SCNpilot_cont_1000_p_scaffold_4217_curated_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5714..7591
DNA (1878bp) protein (626aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745E56
ABC transporter related-protein {ECO:0000313|EMBL:EEF63216.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
uup; ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup
SCNpilot_cont_1000_p_scaffold_4217_curated_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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7660..8493
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1T5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19697.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_4217_curated_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8490..9422
DNA (933bp) protein (311aa)
histone deacetylase (EC:3.5.1.-)
Histone deacetylase superfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1T4_9BACT
Histone deacetylase superfamily {ECO:0000313|EMBL:EDY19696.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_4217_curated_12
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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9454..9783
DNA (330bp) protein (110aa)
Anti-sigma factor antagonist n=1 Tax=Burkholderia sp. RPE64 RepID=R4WPQ0_9BURK
stage II sporulation protein
Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
SCNpilot_cont_1000_p_scaffold_4217_curated_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9789..10346
DNA (558bp) protein (186aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-]
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB52_9BACT
SCNpilot_cont_1000_p_scaffold_4217_curated_14
unknown

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comp(10367..10459)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 14 items

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