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SCNpilot_cont_1000_p_scaffold_1277_curated_8

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: comp(6490..7689)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J8M8_DESRM similarity UNIREF
DB: UNIREF100
  • Identity: 23.5
  • Coverage: 388.0
  • Bit_score: 94
  • Evalue 3.40e-16
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 23.5
  • Coverage: 388.0
  • Bit_score: 94
  • Evalue 1.10e-16
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABO51431.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 23.5
  • Coverage: 388.0
  • Bit_score: 94
  • Evalue 4.70e-16

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Taxonomy

Desulfotomaculum reducens → Desulfotomaculum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1200
ATGGTCGTCGACGAAATCACCTCCAAGCGATCCGATGTGCGGACCAAATCGCCGCTTTGCGACGATAACTACCGCCTGCCCCTGCAGAAGCTCCCCAAGGCGGTGCCCCCGCGCTGGATGTACACCAGCATGCTCTGGAGTATCGGTGTGACCATCGTGCTCACCACCGCGACTCTGCTCAGCCCGATGGATGAGTATGTCACGGCCCCTGGCGAGGTACGCCCTGCCGAGTACGCGTATGTCTTCAGCCGGGCCGAGGGCATCCTGGAAACGATCGAAGTCAAGGACGGCGAAAAGGTCCGACAGGGACAGGTGCTGGCCCGCCTCGATGGCTGGGAAATCCGCAAGCGCATCCGGGAAATCGAAGCCGACATCGCCCAGACGGAAGCCGAACTCGCGATGGGCGAGGCCGCGCAGCGCAAGGTCACTGCGGCCCCGGTTCCCGCCGAGTTTCTTTTCAGCGCGGTCGAGATGGAGCGGCAAAAGGAAATCCAAACCCTCCAGCAGGATTACCTGCACCGCCTGAACGAACTCCAGAAAACCGGAGCCGCCTCCGGCACGGAGCTCCTCAACATTCGCCTCCAGCTCATCGCCTCCGAGTCGATGCTGAAACGCAGCCAGCAGGCCTACGATCTCTTCAAGGGCGACTACGGCGCGGCCTCACAGACCGAGGCGGCCGAGAAGGTGCGCGTCACCGAGGCCCGGCTCGCCGGTTTGCGCTCACGCCTTGAATCCGCCCAGAGCGACCTGAAGCGCCTGGAAATCATCGCCCCCACCGACGGCACCATCCTCACGACCTCCCGCCGCTTTCCGGGAGAAAAGATCGCCGCAGGCACAGCCCTCTTCAAGATCAGCGACGACAACGAAAAGACCGAGCTGCGCCTCTACGCCACCGAGGATCGCGTGAACCTCATCCAGCCGGGCCAGCTCGTGCGTTTCCGTGCCAACAACAATCCCGACCGCCTTGCTCCCCTCGCCATCGCCCGAGTCACCGAGGTCGCCCGCGACCGCGACCTGGCCTCCGAAGAGGATGCGGCAGATGCAAACCGCCTCAGCACCTACCGCGTCAAGGCAGCCATCGAAAAAGAACCTTATCCTCTCGCCGTGGGCGCTACCGTGGAGGCCGAGATCGTGCTGGAGCGCCGCCCGTTCTGGCGACTGCTCCTCATGAAGCCCCAGTCGACAGGCTCCAAGCTCTAG
PROTEIN sequence
Length: 400
MVVDEITSKRSDVRTKSPLCDDNYRLPLQKLPKAVPPRWMYTSMLWSIGVTIVLTTATLLSPMDEYVTAPGEVRPAEYAYVFSRAEGILETIEVKDGEKVRQGQVLARLDGWEIRKRIREIEADIAQTEAELAMGEAAQRKVTAAPVPAEFLFSAVEMERQKEIQTLQQDYLHRLNELQKTGAASGTELLNIRLQLIASESMLKRSQQAYDLFKGDYGAASQTEAAEKVRVTEARLAGLRSRLESAQSDLKRLEIIAPTDGTILTTSRRFPGEKIAAGTALFKISDDNEKTELRLYATEDRVNLIQPGQLVRFRANNNPDRLAPLAIARVTEVARDRDLASEEDAADANRLSTYRVKAAIEKEPYPLAVGATVEAEIVLERRPFWRLLLMKPQSTGSKL*