ggKbase home page

SCNpilot_cont_1000_p_scaffold_4110_curated_8

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: comp(5406..5807)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJV5_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 119.0
  • Bit_score: 112
  • Evalue 3.10e-22
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG76413.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 119.0
  • Bit_score: 112
  • Evalue 4.30e-22
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 123.0
  • Bit_score: 107
  • Evalue 4.10e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dethiobacter alkaliphilus → Dethiobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 402
ATGTTCATCGCGCTCCATCCCTCCAGCGGGGTGCCGCTGTACCTCCAGCTGCTCAATCAGCTGAAGGAGCGCATTGCCAGCGGGCAGGTGAAGCCGGGGGAGCAGCTCCCGTCGGTGCGCGAACTTTCCGCCGATCTGAAGATCAACCCGCTCACGGTGGCCAAGGTGTACCAGATCCTTGAGCGCGAGGGGCTGGTCGAGACGCGGCGCGGCATGGGGACGTTTGTCGCGCAGAAGGTCGAAACCCTGCCTGTGGCCGCACGTCGACAGGCGCTCGACCCCGCCGTGCGCCAGCTCGTAGCCGAGGCCATCCATCTGCGACTCAGTGAGGCCGAGGTCGTCGAGCTCATCGCCCGTCATTTTCAGCAGCTCCATCCCCGCAACTCCTCAAACCAACCATGA
PROTEIN sequence
Length: 134
MFIALHPSSGVPLYLQLLNQLKERIASGQVKPGEQLPSVRELSADLKINPLTVAKVYQILEREGLVETRRGMGTFVAQKVETLPVAARRQALDPAVRQLVAEAIHLRLSEAEVVELIARHFQQLHPRNSSNQP*