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SCNpilot_cont_1000_p_scaffold_4110_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4110_curated_1
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(12..305)
DNA (294bp) protein (98aa)
UPF0251 protein ECTPHS_00964 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G090_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_4110_curated_2
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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453..887
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Photobacterium sp. AK15 RepID=L8JCS3_9GAMM
thioesterase superfamily protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_p_scaffold_4110_curated_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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comp(904..1794)
DNA (891bp) protein (297aa)
Putative uncharacterized protein id=4418907 bin=GWF2_Lentisphaerae_50_93 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein; K09116 hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
SCNpilot_cont_1000_p_scaffold_4110_curated_4
Capsella rubella, Capsella, Brassicales, rosids, Streptophyta, Viridiplantae

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comp(1799..2806)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0H208_9BRAS
Uncharacterized protein {ECO:0000313|EMBL:EOA18695.1}; TaxID=81985 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella.;" source="Capsella rubella.;"
prli-interacting factor l, putative
SCNpilot_cont_1000_p_scaffold_4110_curated_5
unknown

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comp(2889..3698)
DNA (810bp) protein (270aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4110_curated_6
unknown

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comp(3714..4526)
DNA (813bp) protein (271aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4110_curated_7
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

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comp(4531..5409)
DNA (879bp) protein (293aa)
ABC transporter ATP-binding protein n=1 Tax=Zavarzinella formosa RepID=UPI0003177EE9
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
SCNpilot_cont_1000_p_scaffold_4110_curated_8
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5406..5807)
DNA (402bp) protein (134aa)
Transcriptional regulator, GntR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJV5_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG76413.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_4110_curated_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6188..6754
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4B4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18715.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4110_curated_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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6782..8035
DNA (1254bp) protein (418aa)
CinA-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZT4_9BACT
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA
SCNpilot_cont_1000_p_scaffold_4110_curated_11
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(8013..9386)
DNA (1374bp) protein (458aa)
adenine permease n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458E9
xanthine/uracil/vitamin C permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:ACB76860.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_4110_curated_12
unknown

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comp(9551..10666)
DNA (1116bp) protein (372aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4110_curated_13
Leptospira sp. serovar Kenya, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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10778..11614
DNA (837bp) protein (279aa)
Signal transduction protein with multiple domains n=2 Tax=Leptospira borgpetersenii serovar Hardjo-bovis RepID=Q04QZ6_LEPBJ
signal transduction protein
Stage II sporulation protein E {ECO:0000313|EMBL:EMK13994.1}; TaxID=1242991 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira sp. serovar Kenya str. Sh9.;"
SCNpilot_cont_1000_p_scaffold_4110_curated_14
unknown

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11611..11739
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 14 items

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