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SCNpilot_cont_1000_p_scaffold_751_curated_25

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: comp(26186..26914)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 240.0
  • Bit_score: 217
  • Evalue 5.00e-54
pseudouridine synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745D55 similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 240.0
  • Bit_score: 260
  • Evalue 1.70e-66
Pseudouridine synthase {ECO:0000313|EMBL:EDY18336.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 238.0
  • Bit_score: 238
  • Evalue 7.20e-60

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 729
ATGCAGAATCAAGCCGACTTCCACATCCTGGGTGAAACCGCCGACTATCTGGCGGTCGACAAGCCCGCCGGCCTGCTGGTTCACCCCTCGAAGCCCGGCGGCCCGCACACCCTTTGGGATGGCCTGCGCGACCTCCTGGGCTACGAACTCGCCACGGGCGGGCAGATTTCCATCATCAACCGGCTCGACCGCGAGACCAGCGGCGTCGTGATCGTGGCCAAGAGCGCCGAGGCCGCCCGCGCCGCCGGGATCGCCATGCAGCGCCGCGAGATGAAAAAACGCTACCTCGCCCTCGTCTTTGGCTGGCCGGACTGGGAGGAAACGACCGTCAACCACCCGATCTGCCGCCGGGGCGAGGTGGAGGAGTCCATCGTCTGGCTGGAACGGATGGTGCATCCCTCGGGACAGCCCGCAGTCACCCGCTTCCGGGTCCTGGAGCGTCATTCCCGCAAGGGCGAGCCTTTCGCCCTGGTGGAAGCCGAGCCGCTAACTGGTCGCACCCACCAGATCCGCGTTCACGCCGCCTCGCTGGGTTTCCCCGTCATCGGAGACAAGCTCTACGCAAGAGGTCGCGACAAATACCTGCGCTTCATCGACGAGGGTTGGACGGATGCGCTGGCCGCCGATCTCTGGCTGCCTCGACACGCCCTGCACTGCACACAGATGGTTTTCAGGGACAACGTGTGGGACGCCCCGCTGCCCAACGACCTCGCCGCGCTTACCAGATGA
PROTEIN sequence
Length: 243
MQNQADFHILGETADYLAVDKPAGLLVHPSKPGGPHTLWDGLRDLLGYELATGGQISIINRLDRETSGVVIVAKSAEAARAAGIAMQRREMKKRYLALVFGWPDWEETTVNHPICRRGEVEESIVWLERMVHPSGQPAVTRFRVLERHSRKGEPFALVEAEPLTGRTHQIRVHAASLGFPVIGDKLYARGRDKYLRFIDEGWTDALAADLWLPRHALHCTQMVFRDNVWDAPLPNDLAALTR*