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SCNpilot_cont_1000_p_scaffold_751_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_751_curated_1
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

2..1117
DNA (1116bp) protein (372aa)
Putative uncharacterized protein id=2647507 bin=GWF2_Lentisphaerae_57_35 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ABC transporter permease
Tax=CG_Arma_01
SCNpilot_cont_1000_p_scaffold_751_curated_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1825..3729)
DNA (1905bp) protein (635aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Lipopolysaccharide heptosyltransferase II n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3G7_9BACT
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:EDY18797.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_751_curated_3
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3836..4912
DNA (1077bp) protein (359aa)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D535_9BACT
Tax=RBG_16_Deltaproteobacteria_71_12_curated
SCNpilot_cont_1000_p_scaffold_751_curated_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5049..7550
DNA (2502bp) protein (834aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446B0
Tetratricopeptide domain protein {ECO:0000313|EMBL:EEF62481.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SCNpilot_cont_1000_p_scaffold_751_curated_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7568..7768)
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW3_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EDY21283.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiazole biosynthesis protein; K03154 sulfur carrier protein
SCNpilot_cont_1000_p_scaffold_751_curated_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7765..8880)
DNA (1116bp) protein (372aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW4_9BACT
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EDY21284.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH; K03150 thiamine biosynthesis ThiH
SCNpilot_cont_1000_p_scaffold_751_curated_7
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

8970..10232
DNA (1263bp) protein (421aa)
class I/II aminotransferase (EC:2.6.1.66); K00835 valine--pyruvate aminotransferase [EC:2.6.1.66]
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00036CDD97
Tax=GWF2_Lentisphaerae_50_93_curated
SCNpilot_cont_1000_p_scaffold_751_curated_8
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10282..11202
DNA (921bp) protein (307aa)
Aldose 1-epimerase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G955_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:CCY13683.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
SCNpilot_cont_1000_p_scaffold_751_curated_9
unknown

Not on your lists

11199..11399
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_751_curated_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

11426..12826
DNA (1401bp) protein (467aa)
Tetratricopeptide domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3I8_9BACT
Tetratricopeptide domain protein {ECO:0000313|EMBL:EDY18818.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_751_curated_11
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12843..13496
DNA (654bp) protein (218aa)
acid phosphatase n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C8260
Uncharacterized protein {ECO:0000313|EMBL:CEG57927.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
acid phosphatase, class B
SCNpilot_cont_1000_p_scaffold_751_curated_12
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

13607..14965
DNA (1359bp) protein (453aa)
fumarase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZ34_ISOPI
Tax=BJP_IG2102_BRC1_58_13
SCNpilot_cont_1000_p_scaffold_751_curated_13
unknown

Not on your lists

comp(15039..15455)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_751_curated_14
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15549..15911
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CXV6_9BACT
hypothetical protein; K06940
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_751_curated_15
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15899..17332
DNA (1434bp) protein (478aa)
Cardiolipin synthase A {ECO:0000256|HAMAP-Rule:MF_00190, ECO:0000256|SAAS:SAAS00194234}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_00190};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_00190, ECO:0000256|SAAS:SAAS00194223};; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
cls; cardiolipin synthetase (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-]
Cardiolipin synthetase n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1VCS7_HALED
SCNpilot_cont_1000_p_scaffold_751_curated_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(17339..19291)
DNA (1953bp) protein (651aa)
sqhC; Squalene-hopene cyclase; K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129]
Squalene-hopene cyclase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCK3_9BACT
Squalene-hopene cyclase {ECO:0000313|EMBL:EDY15838.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_751_curated_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19288..20577)
DNA (1290bp) protein (430aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKG5_9BACT
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:EEF59635.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hopanoid biosynthesis associated radical SAM protein HpnH
SCNpilot_cont_1000_p_scaffold_751_curated_18
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(20612..21754)
DNA (1143bp) protein (381aa)
DRTGG domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7M3_9BACT
DRTGG domain protein {ECO:0000313|EMBL:EDY17640.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DRTGG domain-containing protein; K06873
SCNpilot_cont_1000_p_scaffold_751_curated_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(21755..22795)
DNA (1041bp) protein (347aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EDY17639.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EDY17639.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Phosphate acetyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7M2_9BACT
phosphate acetyl/butaryl transferase
SCNpilot_cont_1000_p_scaffold_751_curated_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

22840..23712
DNA (873bp) protein (291aa)
Dihydropteroate synthase {ECO:0000313|EMBL:EDY17637.1}; EC=2.5.1.15 {ECO:0000313|EMBL:EDY17637.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7M0_9BACT
SCNpilot_cont_1000_p_scaffold_751_curated_21
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23709..24182
DNA (474bp) protein (158aa)
putative DoxX family protein
DoxX family protein id=720937 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Tax=BJP_IG2102_Syntrophobacterales_60_12
SCNpilot_cont_1000_p_scaffold_751_curated_22
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24136..24621)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI0003729F73
ferric uptake regulator, Fur family; K03711 Fur family transcriptional regulator, ferric uptake regulator
Tax=BJP_IG2102_Ignavibacteriales_35_8
SCNpilot_cont_1000_p_scaffold_751_curated_23
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(24661..25431)
DNA (771bp) protein (257aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Imidazole glycerol phosphate synthase cyclase subunit; K02500 cyclase [EC:4.1.3.-]
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E133_9BACT
SCNpilot_cont_1000_p_scaffold_751_curated_24
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

25531..26196
DNA (666bp) protein (222aa)
yrvJ1; hypothetical protein; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
Cell wall hydrolase/autolysin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6I8_9BACT
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_751_curated_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(26186..26914)
DNA (729bp) protein (243aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
pseudouridine synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745D55
Pseudouridine synthase {ECO:0000313|EMBL:EDY18336.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_751_curated_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

26943..27605
DNA (663bp) protein (221aa)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C8_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY18333.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
SCNpilot_cont_1000_p_scaffold_751_curated_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

27589..28074
DNA (486bp) protein (162aa)
Cyclic nucleotide-binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5C7_9BACT
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EDY18332.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
cyclic nucleotide-binding:bacterial regulatory protein
SCNpilot_cont_1000_p_scaffold_751_curated_28
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

28098..29399
DNA (1302bp) protein (434aa)
bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
bifunctional UDP-3-O n=1 Tax=Rubritalea marina RepID=UPI000375495D
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_751_curated_29
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

29407..30180
DNA (774bp) protein (258aa)
lpxA; acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
UDP-N-acetylglucosamine acyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744C39
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
SCNpilot_cont_1000_p_scaffold_751_curated_30
unknown

Not on your lists

30252..30488
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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