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SCNpilot_cont_1000_p_scaffold_1631_curated_18

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: comp(18793..20193)

Top 3 Functional Annotations

Value Algorithm Source
porin n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745AA7 similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 462.0
  • Bit_score: 472
  • Evalue 6.90e-130
carbohydrate-selective porin, OprB family; K07267 porin similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 428.0
  • Bit_score: 213
  • Evalue 1.10e-52
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 433.0
  • Bit_score: 397
  • Evalue 2.30e-107

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1401
ATGTTCCCTCGCACCCGTGCCGTATACGCGGCTTTGTTTTCGGCGGTATTACCTATTACCGCCTTCACTCAGGCCACCAACAACTCCCGCGCCCTCCCGGCGGAGGATCGGGATTTCCCTCGGGCCACGCCCGAACCTGCCTCCGTCTCGTGGTGGCAGGGTGATTACGCCACGGGCGACTGGTTCGGCCTGCGGCCTAAGCTTAGCGATTATGGATTCGACTTCTTCGCCTATTACAATGCCATCGTGGCGGGCAATGTCGTCGGCGGGCGCAATCAGTCCGCCTCCTACGCCGATGACTTTTACTTCGGCCTGAAGACCGACCTGGAAAAGCTCGTCGGCTGGCAGGGCGCGACCTTCACCATCACCGGGGTGAATCGCGACGGCAACAGCATCCAGGGCGCGCTGGGCAGCCAGTACGACCCCATGCAGCTCGTCGGCGGGCAGGCCATCTTCCTGTATGGCCTCTTCCTTGAGCAAAAGCTCCTCGATGACAAGCTCTCGATCAAGCTGGGCCGCCTCGGCGCGAGCGACGACTTTGCCACCTCGCCGCTGTACGGGTACTACCTGAACAACGGCATCGACGGCAACATCCGCGCGGTGCTCTTCAATACGCGCTTCTCGGCCTATCCCTTCGCCTCGTGGGGCGCGCGGCTGCGCATCGATCCCACGCCGGAGTTCAACGCCATGGTCGGCATCTACCAGGTCTCCAGCCGCATGTTTGACCGCGCCTATCATGGCGTCGACATGAGCATCCAGAGCGGCGATGGGTTCATGCTCATCGGCCAGGTCGGATGGACGCCCGAGTTCTTCAAGCGCGAGGCTCCCGCGCCCGTCTCCGATGGCAAGGCCGTGGTGGCGGACAAAAAGGCGGTCGCCCCGGCGATCAGCCCGACGGCGAAGGGGCTGTCGGGTCATTATTTCTTCGGCGGCTACTGGTCGTCGTGGGATTACCCGCAGTTTGGTCAGACCTCGACCACGCCCGCCAGCTATGGATTCTACCTGCATGGCGACCAGATGGTGTATCGCGAGAATCTCGACAGCGACCAGGGGCTGACGCTCTTCACCACCTTCACCCTGTCGCCGCAGCAGAATGTCGCCATCGTACCCTTCCAGGTGAATGGCGGCGCGATCTACCAGGGCCTCATCCCGGGGCGCGACAATGACCGCACCATCCTCGGCGTGATCTACGGCCAGTTCAGTAATGACTACGCCGACAGCGTCTCCGCGCAGGGCGGCGGCTCGCCCGATTACGAACTCGTCTTTGAGGCGGGCTACCGCGTGCAGTTGAATAAATGGGCCTACATCCAGCCCGACGTGCAGTGGGTCATCCAGCCCGGCGGCACGGGCGACATCCCCAACGGCCTCGTCCTCGGCGCACAATTCGGCGTGAAGTTTTAG
PROTEIN sequence
Length: 467
MFPRTRAVYAALFSAVLPITAFTQATNNSRALPAEDRDFPRATPEPASVSWWQGDYATGDWFGLRPKLSDYGFDFFAYYNAIVAGNVVGGRNQSASYADDFYFGLKTDLEKLVGWQGATFTITGVNRDGNSIQGALGSQYDPMQLVGGQAIFLYGLFLEQKLLDDKLSIKLGRLGASDDFATSPLYGYYLNNGIDGNIRAVLFNTRFSAYPFASWGARLRIDPTPEFNAMVGIYQVSSRMFDRAYHGVDMSIQSGDGFMLIGQVGWTPEFFKREAPAPVSDGKAVVADKKAVAPAISPTAKGLSGHYFFGGYWSSWDYPQFGQTSTTPASYGFYLHGDQMVYRENLDSDQGLTLFTTFTLSPQQNVAIVPFQVNGGAIYQGLIPGRDNDRTILGVIYGQFSNDYADSVSAQGGGSPDYELVFEAGYRVQLNKWAYIQPDVQWVIQPGGTGDIPNGLVLGAQFGVKF*