ggKbase home page

SCNpilot_cont_1000_p_scaffold_780_curated_7

Organism: scnpilot_dereplicated_Verrucomicrobia_1

near complete RP 51 / 55 MC: 2 BSCG 48 / 51 MC: 4 ASCG 14 / 38
Location: comp(5490..6335)

Top 3 Functional Annotations

Value Algorithm Source
shikimate kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174641E similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 279.0
  • Bit_score: 217
  • Evalue 1.40e-53
ActC family protein {ECO:0000313|EMBL:EDY20026.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 208.0
  • Bit_score: 212
  • Evalue 8.40e-52
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 275.0
  • Bit_score: 189
  • Evalue 1.70e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 846
TTGCCGAAGGTAATCATAGCCGGCTGCGGTTTCCTCGGAGAGGCCGCAGCCGATTTGTTTTTTAGTTCCGGCTGGGAGGTGCTCGCCTTCGGTCGGGAAGACTCCGTCCGGCGGCTTGCCGGGAAGCCATACGAGGTTCGTGCTCAGGATCTTGCGCGGGAATTTTTGCTTGATGCTCCCTGGCGCGGGGCCGATGCCCTGATCTATGCGGTCAGCACGCGGGGAGGGGATGCCGAGGCCTATCGCCTGGCCTACCTTGAGGGATTTCTCAACACCATCGCCGCTGCCAAGCCCCGGCGCTCGCTTTTCGTCAGCAGCACGTCGGTTTACGCCCAAAGGGACGGGGAATGGGTGACGGAAGAGAGTCCGGCTGATCCCTCGCGGGACACGGGGCTCATCCTCCGCGATGCCGAGGGCGTGGCCCTGGCCTCGGGTGGCTACGTAGTGAGGCTGGCGGGTCTTTACGGTCCGAATCGCTCGGTTTTGCTCAAGCGCTACCTCGCGAAGGAGGCCGCTCTCGATGGCGAGGGCAGCCGCTGGATCAACCAGATCCACCGGGATGACGCGGCGAAGGCGATTTTCCACCTCTTTGCGCACCGTTGCGCTCCCGGCATTTACAACGTCGCTGACGATCAGCCCGCCACCCAGCGTGAGGTTTACCAGTGGATCGCCGATTTCCTCGGTGGAGACCTGCCTGCACCAGCGCAGGGNNNNNNNNTTCGCCGACGCGGGGCTAGCAACAAGCGGGTCTCCACTGCGAGGCTGAAGTCTGCCGGGTGGGCTCCCACGTATCCCTCCTATCGCGACGCCCTGCCGGAACTGGTCCAGGCCGAGAGGCAGATTTGA
PROTEIN sequence
Length: 282
LPKVIIAGCGFLGEAAADLFFSSGWEVLAFGREDSVRRLAGKPYEVRAQDLAREFLLDAPWRGADALIYAVSTRGGDAEAYRLAYLEGFLNTIAAAKPRRSLFVSSTSVYAQRDGEWVTEESPADPSRDTGLILRDAEGVALASGGYVVRLAGLYGPNRSVLLKRYLAKEAALDGEGSRWINQIHRDDAAKAIFHLFAHRCAPGIYNVADDQPATQREVYQWIADFLGGDLPAPAQXXXXRRRGASNKRVSTARLKSAGWAPTYPSYRDALPELVQAERQI*