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SCNpilot_cont_1000_p_scaffold_780_curated

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_780_curated_1
bacterium UASB270, Bacteria

Not on your lists

comp(3..413)
DNA (411bp) protein (137aa)
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:GAK58747.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
L-iditol 2-dehydrogenase id=2559853 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
putative zinc-containing alcohol dehydrogenase
SCNpilot_cont_1000_p_scaffold_780_curated_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(449..1495)
DNA (1047bp) protein (349aa)
Putative aldo/keto reductase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3J4_CALAS
putative aldo/keto reductase
Putative aldo/keto reductase {ECO:0000313|EMBL:BAL99831.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_cont_1000_p_scaffold_780_curated_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1542..2414
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5Y6_9BACT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDY18189.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_780_curated_4
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(2418..3374)
DNA (957bp) protein (319aa)
Transcriptional regulator, LacI family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUI3_9BACT
LacI family transcriptional regulator {ECO:0000313|EMBL:AHF91269.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
LacI family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_780_curated_5
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

3437..4819
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ASB3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIP97904.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_780_curated_6
unknown

Not on your lists

comp(4825..5442)
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_780_curated_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(5490..6335)
DNA (846bp) protein (282aa)
shikimate kinase n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174641E
ActC family protein {ECO:0000313|EMBL:EDY20026.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
NAD-dependent epimerase/dehydratase
SCNpilot_cont_1000_p_scaffold_780_curated_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(6344..6547)
DNA (204bp) protein (68aa)
30S ribosomal protein S21 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CUI2_9BACT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
SCNpilot_cont_1000_p_scaffold_780_curated_9
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

6663..7337
DNA (675bp) protein (225aa)
Putative exported protein id=4048561 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
SCNpilot_cont_1000_p_scaffold_780_curated_10
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

7345..10125
DNA (2781bp) protein (927aa)
ATP-dependent nuclease subunit B-like protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTJ0_OPITP
ATP-dependent nuclease subunit B-like protein
ATP-dependent nuclease subunit B-like protein {ECO:0000313|EMBL:ACB73935.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_780_curated_11
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

10101..13211
DNA (3111bp) protein (1037aa)
UvrD/REP helicase id=4014465 bin=GWF2_Lentisphaerae_57_35 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
UvrD/REP helicase
Tax=GWF2_Lentisphaerae_57_35_curated
SCNpilot_cont_1000_p_scaffold_780_curated_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13292..13966
DNA (675bp) protein (225aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CTQ4_9BACT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDY21942.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_cont_1000_p_scaffold_780_curated_13
unknown

Not on your lists

comp(13979..15235)
DNA (1257bp) protein (419aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_780_curated_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15382..16188
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=B3QHY0_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF01327.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_1000_p_scaffold_780_curated_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16185..16682
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07MR7_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ06767.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_1000_p_scaffold_780_curated_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(16693..17979)
DNA (1287bp) protein (429aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
Glutamate dehydrogenase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5I8_9BACT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_780_curated_17
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18122..18496)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO35343.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;"
Uncharacterized protein id=3439092 bin=GWC2_Ignavibacteria_38_9 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
SCNpilot_cont_1000_p_scaffold_780_curated_18
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(18581..18901)
DNA (321bp) protein (107aa)
Tax=BJP_IG2157_Anaerolineales_55_23
SCNpilot_cont_1000_p_scaffold_780_curated_19
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

comp(18898..20070)
DNA (1173bp) protein (391aa)
UPI0003CE76AB related cluster n=1 Tax=unknown RepID=UPI0003CE76AB
Protein of unknown function (DUF1625)
Tax=CG_CP02_01
SCNpilot_cont_1000_p_scaffold_780_curated_20
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(20110..20991)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAY9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AKC82251.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_780_curated_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

21273..21908
DNA (636bp) protein (212aa)
LexA family transcriptional repressor; K01356 repressor LexA [EC:3.4.21.88]
Peptidase S24 and S26 domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBY7_9BACT
Peptidase S24 and S26 domain protein {ECO:0000313|EMBL:EDY16034.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_1000_p_scaffold_780_curated_22
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21912..28718)
DNA (6807bp) protein (2269aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WMV5_BURSC
Outer membrane transport barrel {ECO:0000313|EMBL:EJL08781.1}; TaxID=1038921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis subsp. aureofaciens 30-84.;"
outer membrane autotransporter barrel protein
SCNpilot_cont_1000_p_scaffold_780_curated_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28808..29509)
DNA (702bp) protein (234aa)
Sensory transduction protein lytR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCV1_SALRM
lytR; sensory transduction protein lytR
Sensory transduction protein lytR {ECO:0000313|EMBL:CBH25856.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
SCNpilot_cont_1000_p_scaffold_780_curated_24
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29506..31041)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036BD1BC
Uncharacterized protein {ECO:0000313|EMBL:KJS36120.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_c22.;"
Sensor protein lytS
SCNpilot_cont_1000_p_scaffold_780_curated_25
Leptospira kmetyi, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(31178..31759)
DNA (582bp) protein (194aa)
Carbonate dehydratase {ECO:0000313|EMBL:EQA53524.1}; EC=4.2.1.1 {ECO:0000313|EMBL:EQA53524.1};; TaxID=1049970 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira kmetyi serovar Malaysia str. Bejo-Iso9.;"
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonate dehydratase n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HL64_9LEPT
SCNpilot_cont_1000_p_scaffold_780_curated_26
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

31874..32827
DNA (954bp) protein (318aa)
Transcriptional regulator, LuxR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVS1_OPITP
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACB75007.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCNpilot_cont_1000_p_scaffold_780_curated_27
unknown

Not on your lists

32867..33817
DNA (951bp) protein (317aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_780_curated_28
unknown

Not on your lists

33976..34230
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_780_curated_29
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

34908..36497
DNA (1590bp) protein (530aa)
Glycoside hydrolase family 5 id=4357656 bin=GWF2_Lentisphaerae_50_93 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
glycoside hydrolase family protein
Tax=CG_Arma_02
SCNpilot_cont_1000_p_scaffold_780_curated_30
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

36587..36940
DNA (354bp) protein (118aa)
hypothetical protein; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037A475B
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Displaying items 1-30 of 58 in total

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