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scnpilot_p_inoc_scaffold_801_curated

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_801_curated_1
unknown

Not on your lists

comp(124..900)
DNA (777bp) protein (259aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_801_curated_2
unknown

Not on your lists

comp(1304..1468)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_801_curated_3
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1626..2240
DNA (615bp) protein (205aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TXY3_STEMA
scnpilot_p_inoc_scaffold_801_curated_4
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2240..2866
DNA (627bp) protein (209aa)
Cell division inhibitor SulA n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GVN1_XANCT
Cell division inhibitor SulA {ECO:0000313|EMBL:ELQ09783.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
hypothetical protein
scnpilot_p_inoc_scaffold_801_curated_5
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2877..4283
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AMM1_PSERE
hypothetical protein
DNA repair nucleotidyltransferase {ECO:0000313|EMBL:KGM50860.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
scnpilot_p_inoc_scaffold_801_curated_6
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4280..5737
DNA (1458bp) protein (486aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
dnaE2; error-prone DNA polymerase (EC:2.7.7.7)
DNA polymerase n=1 Tax=Pseudomonas nitroreducens RepID=UPI00030A1106
scnpilot_p_inoc_scaffold_801_curated_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5926..6369
DNA (444bp) protein (148aa)
MerR family transcriptional regulator {ECO:0000313|EMBL:ETW95374.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Transcriptional regulator, MerR family id=3552008 bin=GWC2_Proteo_65_14_Ab886 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
putative transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
scnpilot_p_inoc_scaffold_801_curated_8
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6356..6718
DNA (363bp) protein (121aa)
copper chaperone id=12556458 bin=CNBR_ACIDO species=Nafulsella turpanensis genus=Nafulsella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
copper chaperone
Copper chaperone {ECO:0000313|EMBL:AFL85371.1}; Flags: Precursor;; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_801_curated_9
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6715..7404
DNA (690bp) protein (230aa)
thiol:disulfide interchange protein id=12556476 bin=CNBR_ACIDO species=Nafulsella turpanensis genus=Nafulsella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiol:disulfide interchange protein
Thiol:disulfide interchange protein {ECO:0000313|EMBL:AFL85372.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_801_curated_10
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7417..9819
DNA (2403bp) protein (801aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z802_BELBD
copper/silver-translocating P-type ATPase
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:AFL85370.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_p_inoc_scaffold_801_curated_11
unknown

Not on your lists

10138..10383
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_801_curated_12
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10380..11834
DNA (1455bp) protein (485aa)
hcnB; hydrogen cyanide synthase HcnB; K10815 hydrogen cyanide synthase HcnB [EC:1.4.99.5]
Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster id=4600709 bin=GWC2_Methylomirabilis_70_16 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
scnpilot_p_inoc_scaffold_801_curated_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11831..13084
DNA (1254bp) protein (418aa)
FAD dependent oxidoreductase; K10816 hydrogen cyanide synthase HcnC [EC:1.4.99.5]
Hydrogen cyanide synthase HcnC n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3KAF2_PSEPF
Hydrogen cyanide synthase HcnC {ECO:0000313|EMBL:ABA75252.1}; TaxID=205922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf0-1).;"
scnpilot_p_inoc_scaffold_801_curated_14
unknown

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13137..13373
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_801_curated_15
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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13755..14084
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_p_inoc_scaffold_801_curated_16
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

14198..14566
DNA (369bp) protein (123aa)
SnoaL-like polyketide cyclase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A888_DEIPD
SnoaL-like polyketide cyclase
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:AFZ69285.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
scnpilot_p_inoc_scaffold_801_curated_17
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14798..16033
DNA (1236bp) protein (412aa)
Drug resistance transporter Bcr/CflA subfamily n=1 Tax=Rhizobium sp. RepID=L0NND8_RHISP
Putative Drug resistance transporter Bcr/CflA subfamily {ECO:0000313|EMBL:CEG54766.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
scnpilot_p_inoc_scaffold_801_curated_18
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16171..17232)
DNA (1062bp) protein (354aa)
Cointegrate resolution protein T n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KNN3_STEMA
Transposase {ECO:0000313|EMBL:KGM51412.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
cointegrate resolution protein T
scnpilot_p_inoc_scaffold_801_curated_19
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17450..18724
DNA (1275bp) protein (425aa)
Integrase-like protein n=2 Tax=Xanthomonas RepID=Q8PRL1_XANAC
integrase-like protein
Integrase-like protein {ECO:0000313|EMBL:AGH78711.1}; TaxID=1304892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis Xac29-1.;"
scnpilot_p_inoc_scaffold_801_curated_20
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18732..21725
DNA (2994bp) protein (998aa)
Tn5044 transposase n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4T3S6_9XANT
Tn5044 transposase {ECO:0000313|EMBL:EFF48653.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;"
transposase
scnpilot_p_inoc_scaffold_801_curated_21
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21889..23475
DNA (1587bp) protein (529aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
error-prone DNA polymerase (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7]
DNA polymerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D26FBB
scnpilot_p_inoc_scaffold_801_curated_22
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23735..25675)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z2L4_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU25244.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
scnpilot_p_inoc_scaffold_801_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25663..26610)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003667484
Mg chelatase-related protein
Mg chelatase-related protein {ECO:0000313|EMBL:AGG90666.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_p_inoc_scaffold_801_curated_24
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26674..26934)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B71B41
Uncharacterized protein {ECO:0000313|EMBL:KFN43966.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein; K09806 hypothetical protein
scnpilot_p_inoc_scaffold_801_curated_25
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27303..27641
DNA (339bp) protein (113aa)
nitrogen regulatory protein P-II 1 n=1 Tax=Dyella ginsengisoli RepID=UPI00034C03E6
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:AHX15095.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
nitrogen regulatory protein PII
scnpilot_p_inoc_scaffold_801_curated_26
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27721..27930
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45316.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_p_inoc_scaffold_801_curated_27
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28144..28812
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376B4D9
Uncharacterized protein {ECO:0000313|EMBL:GAN45315.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_801_curated_28
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29093..30163)
DNA (1071bp) protein (357aa)
pldA; outer membrane phospholipase A (EC:3.1.1.32); K01058 phospholipase A1 [EC:3.1.1.32]
Outer membrane phospholipase A {ECO:0000313|EMBL:CAJ23152.1}; EC=3.1.1.32 {ECO:0000313|EMBL:CAJ23152.1};; Flags: Precursor;; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
Outer membrane phospholipase A n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BVG2_XANC5
scnpilot_p_inoc_scaffold_801_curated_29
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30254..31135)
DNA (882bp) protein (294aa)
biotin biosynthesis protein BioC; K02169 malonyl-CoA O-methyltransferase [EC:2.1.1.197]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036BD5E0
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_p_inoc_scaffold_801_curated_30
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31132..31905)
DNA (774bp) protein (258aa)
Pimeloyl-[acyl-carrier protein] methyl ester esterase {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064125}; EC=3.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01260, ECO:0000256|SAAS:SAAS00064111};; Biotin synthesis protein BioH {ECO:0000256|HAMAP-Rule:MF_01260}; Carboxylesterase BioH {ECO:0000256|HAMAP-Rule:MF_01260}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
bioH; putative pimeloyl-BioC--CoA transferase BioH; K02170 pimelyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382188E
Displaying items 1-30 of 39 in total

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