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scnpilot_p_inoc_scaffold_1530_curated_11

Organism: scnpilot_dereplicated_Xanthomonadales_3

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(10531..11634)

Top 3 Functional Annotations

Value Algorithm Source
Recombination associated protein RdgC n=2 Tax=Xanthomonas RepID=V7Z8I7_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 32.7
  • Coverage: 275.0
  • Bit_score: 146
  • Evalue 6.90e-32
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.7
  • Coverage: 275.0
  • Bit_score: 146
  • Evalue 9.70e-32
rdgC; recombination associated protein; K03554 recombination associated protein RdgC similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 275.0
  • Bit_score: 143
  • Evalue 1.80e-31

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Taxonomy

Xanthomonas gardneri → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
ATGATTGCGGAGAATGGCGAGATCGGGGGCGCGTCGTGGACCGTAATACCCGGTCCAGCATTGAATCAAGGGCTGATTGATTGCGGCTTAAATGAGGACTGTCCTCGCTGCTCTGCACACTTCATGCTCAACAACCTCAACCTCTATGTCTTCCCAGCCGGCGCGGAGTTCTCCTACGAAACCGTGCTCCAGGCGTTGAGTCGCGTGCCGGTACGGCCCTGCGGCCCGCTGGAGATGTCCACGCTGGGCTTTGAATCCATTTTTGGCGAAAGCGATGACCGACTGCTGATGCGCGTCGAGAACAACGTGTTCTGCTTTATGGCTGCGGGGGAAGAAAAATCACTGCTCAACCCTGTGCTTCGAAAACGGTTGGCCGCCGCCATACAGGCGTTCGAAGTGGAAAAAAATCGGCGGCCGACCAAGTCGGAGCAAGAGGAACTGAAGAACCGTGTAATCAACGCCATGACCGCCGAAACCATGGGATGTCCCTTCGAGGTCGCGTGCATGATCGACCTCGATCAGGGTTGGCTGGCTGTTGGTGCGCTGTCGGGTACGCGGAGCGAAGCGATTGTTTCCGCAATGCGCCTGGCGCTGCGCAGTTTCCCTGCCCGACCGGCCATGTCCAAGGTTGCACCGCAAGCTGTGCTGACGGACTGGCTGCTCAACCAGAAAGCACCCGAACCGCTCGAACTTGGGCAAGATTGCGACCTGGTGTTCCCCGAGGAAACGACGCGCTGCTGGCGCGGTCGCAGGACCGAACTCATTGGCCAGGAAGTGCAAACGCATCTGGCGGAAGGCATGCGCGCAAGCCTGCTTGGGCTGGTCATGGGGGATGCCTCCTTTTCCATCGACACCACCCTTCGCCTACGCAGCCTCAAGGTTCTGGAGCCGGACCAAGCAACGAACGAAGATGAAAATGTCAAAGCTGCCGAGATTCTGCGGCTGGCCCGGACACTCATCTCCCTCCTGCCGTTCATCGAGCAACATTTCGGGATCGAGCGACCGACACCTGTGTCCATGGAGGACTCTGCCGCAAGCGCCGTAGCCAGCAATTCATTCGCGCGAATGGATTTCACCTACGACGAAAGCGTCGCAGACGTCTGA
PROTEIN sequence
Length: 368
MIAENGEIGGASWTVIPGPALNQGLIDCGLNEDCPRCSAHFMLNNLNLYVFPAGAEFSYETVLQALSRVPVRPCGPLEMSTLGFESIFGESDDRLLMRVENNVFCFMAAGEEKSLLNPVLRKRLAAAIQAFEVEKNRRPTKSEQEELKNRVINAMTAETMGCPFEVACMIDLDQGWLAVGALSGTRSEAIVSAMRLALRSFPARPAMSKVAPQAVLTDWLLNQKAPEPLELGQDCDLVFPEETTRCWRGRRTELIGQEVQTHLAEGMRASLLGLVMGDASFSIDTTLRLRSLKVLEPDQATNEDENVKAAEILRLARTLISLLPFIEQHFGIERPTPVSMEDSAASAVASNSFARMDFTYDESVADV*