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scnpilot_p_inoc_scaffold_1530_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1530_curated_1
unknown

Not on your lists

comp(2..241)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1530_curated_2
unknown

Not on your lists

comp(338..586)
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1530_curated_3
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(576..3767)
DNA (3192bp) protein (1064aa)
Helicase superfamily protein II n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EJC7_9BURK
Helicase {ECO:0000313|EMBL:KDP83506.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
helicase
scnpilot_p_inoc_scaffold_1530_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4025..4807)
DNA (783bp) protein (261aa)
PRTRC system ThiF family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE88_9GAMM
PRTRC system ThiF family protein
PRTRC system ThiF family protein {ECO:0000313|EMBL:AGG89049.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_p_inoc_scaffold_1530_curated_5

Not on your lists

comp(4873..5538)
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1BDF9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD67882.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PRTRC system protein A
scnpilot_p_inoc_scaffold_1530_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5535..6341)
DNA (807bp) protein (269aa)
PRTRC system protein B n=1 Tax=Rhodanobacter denitrificans RepID=M4NG49_9GAMM
PRTRC system protein B
PRTRC system protein B {ECO:0000313|EMBL:AGG89047.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_p_inoc_scaffold_1530_curated_7
unknown

Not on your lists

comp(6328..7647)
DNA (1320bp) protein (440aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1530_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7644..8021)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE84_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89044.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_p_inoc_scaffold_1530_curated_9
unknown

Not on your lists

comp(8018..8566)
DNA (549bp) protein (183aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1530_curated_10

Not on your lists

comp(8646..10394)
DNA (1749bp) protein (583aa)
ParB family protein n=2 Tax=mine drainage metagenome RepID=T1CJF4_9ZZZZ
ParB family protein {ECO:0000313|EMBL:EQD67880.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PRTRC system ParB family protein
scnpilot_p_inoc_scaffold_1530_curated_11
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10531..11634)
DNA (1104bp) protein (368aa)
Recombination associated protein RdgC n=2 Tax=Xanthomonas RepID=V7Z8I7_9XANT
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
rdgC; recombination associated protein; K03554 recombination associated protein RdgC
scnpilot_p_inoc_scaffold_1530_curated_12
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

11663..12928
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1IBY4_9PSEU
Tax=CG_Anaero_02
scnpilot_p_inoc_scaffold_1530_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12950..13984
DNA (1035bp) protein (345aa)
ClpP class periplasmic serine protease n=1 Tax=Rhodanobacter denitrificans RepID=M4NE77_9GAMM
ClpP class periplasmic serine protease
ClpP class periplasmic serine protease {ECO:0000313|EMBL:AGG89034.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_p_inoc_scaffold_1530_curated_14

Not on your lists

14002..14973
DNA (972bp) protein (324aa)
Zinc metalloproteinase Mpr protein n=1 Tax=mine drainage metagenome RepID=T1C2K9_9ZZZZ
Zinc metalloproteinase Mpr protein {ECO:0000313|EMBL:EQD79681.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SprT-like family
scnpilot_p_inoc_scaffold_1530_curated_15
unknown

Not on your lists

comp(15299..15460)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1530_curated_16
Halomonas huangheensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15491..16951
DNA (1461bp) protein (487aa)
single-stranded DNA-specific exonuclease (EC:3.1.-.-)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AEF641
Uncharacterized protein {ECO:0000313|EMBL:ERL52217.1}; TaxID=1178482 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheensis.;"
scnpilot_p_inoc_scaffold_1530_curated_17
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17083..18771
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G5V8_BURVI
Uncharacterized protein {ECO:0000313|EMBL:ERJ38692.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
hypothetical protein
Displaying 17 items

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