name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_bf_inoc_scaffold_242_curated_1
Edwardsiella piscicida, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..121
|
Elongation factor Tu n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4LBV9_TOLAT
elongation factor Tu; K02358 elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1288122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella piscicida C07-087.;"
|
|
SCNpilot_bf_inoc_scaffold_242_curated_2
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
261..572
|
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
30S ribosomal protein S10 id=2431938 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
|
|
SCNpilot_bf_inoc_scaffold_242_curated_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
583..1224
|
50S ribosomal protein L3 n=1 Tax=Dyella japonica RepID=UPI00031AF103
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
LSU ribosomal protein L3P
|
|
SCNpilot_bf_inoc_scaffold_242_curated_4
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1236..1841
|
50S ribosomal protein L4 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYK4_FRAAD
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
|
|
SCNpilot_bf_inoc_scaffold_242_curated_5 |
Not on your lists |
1838..2134
|
50S ribosomal protein L23 n=1 Tax=mine drainage metagenome RepID=T1B8W0_9ZZZZ
50S ribosomal protein L23 {ECO:0000313|EMBL:EQD50620.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ribosomal protein L23
|
|
SCNpilot_bf_inoc_scaffold_242_curated_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2155..2979
|
50S ribosomal protein L2 n=1 Tax=Dyella ginsengisoli RepID=UPI00034717B5
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
LSU ribosomal protein L2P
|
|
SCNpilot_bf_inoc_scaffold_242_curated_7 |
Not on your lists |
2992..3291
|
Ribosomal protein S19, bacterial-type n=1 Tax=mine drainage metagenome RepID=T1A185_9ZZZZ
Ribosomal protein S19, bacterial-type {ECO:0000313|EMBL:EQD50622.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
|
|
SCNpilot_bf_inoc_scaffold_242_curated_8 |
Not on your lists |
3303..3638
|
Ribosomal protein L22, bacterial-type n=1 Tax=mine drainage metagenome RepID=T1A129_9ZZZZ
Ribosomal protein L22, bacterial-type {ECO:0000313|EMBL:EQD50623.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LSU ribosomal protein L22P
|
|
SCNpilot_bf_inoc_scaffold_242_curated_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3641..4414
|
30S ribosomal protein S3 n=1 Tax=Rudaea cellulosilytica RepID=UPI000366C5E2
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
|
|
SCNpilot_bf_inoc_scaffold_242_curated_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4418..4831
|
50S ribosomal protein L16 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDS3_9GAMM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
|
|
SCNpilot_bf_inoc_scaffold_242_curated_11
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4831..5031
|
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000381F043
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
|
|
SCNpilot_bf_inoc_scaffold_242_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5031..5309
|
30S ribosomal protein S17 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ56_9GAMM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SSU ribosomal protein S17P
|
|
SCNpilot_bf_inoc_scaffold_242_curated_13 |
Not on your lists |
5323..5691
|
Ribosomal protein L14, bacterial-type n=2 Tax=mine drainage metagenome RepID=T1A188_9ZZZZ
Ribosomal protein L14, bacterial-type {ECO:0000313|EMBL:EQD50627.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
LSU ribosomal protein L14P
|
|
SCNpilot_bf_inoc_scaffold_242_curated_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5851..6165
|
50S ribosomal protein L24 n=1 Tax=Dyella japonica RepID=UPI0002E7A12E
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ribosomal protein L24, bacterial/organelle
|
|
SCNpilot_bf_inoc_scaffold_242_curated_15
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6176..6715
|
50S ribosomal protein L5 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4DF36
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
|
|
SCNpilot_bf_inoc_scaffold_242_curated_16
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6732..7037
|
30S ribosomal protein S14 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B60885
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
|
|
SCNpilot_bf_inoc_scaffold_242_curated_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7181..7576
|
30S ribosomal protein S8 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL55_9GAMM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ribosomal protein S8
|
|
SCNpilot_bf_inoc_scaffold_242_curated_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7595..8119
|
50S ribosomal protein L6 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK3_9GAMM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
LSU ribosomal protein L6P
|
|
SCNpilot_bf_inoc_scaffold_242_curated_19
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8122..8478
|
50S ribosomal protein L18 n=1 Tax=Dyella japonica RepID=UPI000315AEAA
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
|
|
SCNpilot_bf_inoc_scaffold_242_curated_20
unknown
|
Not on your lists |
8509..8673
|
This feature has no annotations |
|
SCNpilot_bf_inoc_scaffold_242_curated_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8719..9237
|
30S ribosomal protein S5 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK5_9GAMM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
|
|
SCNpilot_bf_inoc_scaffold_242_curated_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9227..9427
|
50S ribosomal protein L30 n=1 Tax=Dyella ginsengisoli RepID=UPI000344A08F
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
LSU ribosomal protein L30P
|
|
SCNpilot_bf_inoc_scaffold_242_curated_23
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9578..10009
|
50S ribosomal protein L15 n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8KYM2_FRAAD
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
|
|
SCNpilot_bf_inoc_scaffold_242_curated_24
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10016..11344
|
Protein translocase subunit SecY n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK8_9GAMM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
preprotein translocase, SecY subunit
|
|
SCNpilot_bf_inoc_scaffold_242_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11504..11860
|
30S ribosomal protein S13 n=2 Tax=Rhodanobacter RepID=I4WKT4_9GAMM
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
|
|
SCNpilot_bf_inoc_scaffold_242_curated_26
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12058..12447
|
30S ribosomal protein S11 n=11 Tax=Stenotrophomonas RepID=RS11_STRM5
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
|
|
SCNpilot_bf_inoc_scaffold_242_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12449..13078
|
30S ribosomal protein S4 n=1 Tax=Rhodanobacter denitrificans RepID=I4WKT6_9GAMM
SSU ribosomal protein S4P
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
SCNpilot_bf_inoc_scaffold_242_curated_28
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13215..14213
|
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNL2_9GAMM
|
|
SCNpilot_bf_inoc_scaffold_242_curated_29
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14307..14690
|
50S ribosomal protein L17 n=1 Tax=Dyella ginsengisoli RepID=UPI00036F5379
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
|
|
SCNpilot_bf_inoc_scaffold_242_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14809..15360
|
Disulfide bond formation protein B n=1 Tax=Rhodanobacter denitrificans RepID=M4NBX2_9GAMM
disulfide bond formation protein DsbB
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|