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scnpilot_expt_750_bf_scaffold_458_curated

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_458_curated_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUC1_CHIPD
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACU59161.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_expt_750_bf_scaffold_458_curated_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(505..1758)
DNA (1254bp) protein (418aa)
metallophosphoesterase
Metallophosphoesterase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W736_DYAFD
Metallophosphoesterase {ECO:0000313|EMBL:ACT92645.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_expt_750_bf_scaffold_458_curated_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1778..2878)
DNA (1101bp) protein (367aa)
Phosphoglyceromutase {ECO:0000313|EMBL:KIA85204.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Phosphoglyceromutase n=1 Tax=Flavobacterium sp. CF136 RepID=J3C8L5_9FLAO rbh
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_458_curated_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2932..4581)
DNA (1650bp) protein (550aa)
glycerophosphoryl diester phosphodiesterase rbh
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGW0_RUNSL rbh
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AEI49144.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_expt_750_bf_scaffold_458_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4750..5757)
DNA (1008bp) protein (336aa)
hypothetical protein rbh
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPY0_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV99974.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_458_curated_6
unknown

Not on your lists

5794..6276
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_458_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6447..7556
DNA (1110bp) protein (370aa)
Cellulase n=1 Tax=Niabella soli DSM 19437 RepID=H1NRM5_9SPHI rbh
Peptidase M42 {ECO:0000313|EMBL:AHF15493.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cellulase rbh
scnpilot_expt_750_bf_scaffold_458_curated_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8084..9685
DNA (1602bp) protein (534aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC93468.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_expt_750_bf_scaffold_458_curated_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9703..10683)
DNA (981bp) protein (327aa)
Phosphate starvation protein PhoH {ECO:0000313|EMBL:KIC93101.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins rbh
PhoH family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N6_NIAKG rbh
scnpilot_expt_750_bf_scaffold_458_curated_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10809..13316)
DNA (2508bp) protein (836aa)
TonB-dependent receptor rbh
TonB-dependent receptor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPE2_NIAKG rbh
TonB-dependent receptor {ECO:0000313|EMBL:AEV96748.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_458_curated_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13455..14765
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377A6A5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU64147.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_expt_750_bf_scaffold_458_curated_12
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14882..15751
DNA (870bp) protein (290aa)
AraC family transcriptional regulator {ECO:0000313|EMBL:AHM60845.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003636774
AraC family transcriptional regulator
scnpilot_expt_750_bf_scaffold_458_curated_13
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15912..16835
DNA (924bp) protein (308aa)
Xylose isomerase domain-containing protein {ECO:0000313|EMBL:AHM60842.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C3W9_9BACT rbh
xylose isomerase domain-containing protein rbh
scnpilot_expt_750_bf_scaffold_458_curated_14
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17169..18305
DNA (1137bp) protein (379aa)
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:AHM60841.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
oxidoreductase domain protein rbh
Oxidoreductase domain protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K6L9_9BACT rbh
scnpilot_expt_750_bf_scaffold_458_curated_15
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18723..22217
DNA (3495bp) protein (1165aa)
dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI00035F0030 rbh
Auracyanin-A {ECO:0000313|EMBL:EKB50283.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
membrane-bound dehydrogenase domain-containing protein rbh
scnpilot_expt_750_bf_scaffold_458_curated_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22413..23513
DNA (1101bp) protein (367aa)
Lipoprotein {ECO:0000313|EMBL:KIC91612.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein rbh
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC90_NIAKG rbh
scnpilot_expt_750_bf_scaffold_458_curated_17
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23652..24800
DNA (1149bp) protein (383aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=3001652 bin=GWA2_Bacteroidetes_42_15 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_42_39_curated
alkyl hydroperoxide reductase
scnpilot_expt_750_bf_scaffold_458_curated_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25040..25534
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO44713.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Putative prophage protein (ps3)
Putative prophage protein (Ps3) n=1 Tax=Dehalobacter sp. CF RepID=K4L274_9FIRM
scnpilot_expt_750_bf_scaffold_458_curated_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25534..25974
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO44712.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQR9_9SYNE
hypothetical protein
scnpilot_expt_750_bf_scaffold_458_curated_20
unknown

Not on your lists

comp(26033..26134)
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_458_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26497..26913)
DNA (417bp) protein (139aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE21_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:AEW03569.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_458_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26971..28293)
DNA (1323bp) protein (441aa)
glycine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] rbh
Serine hydroxymethyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE22_NIAKG rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_458_curated_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28391..29383
DNA (993bp) protein (331aa)
nucleotidyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] rbh
Nucleotidyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE23_NIAKG rbh
Nucleotidyl transferase {ECO:0000313|EMBL:AEW03571.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_458_curated_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29570..30514
DNA (945bp) protein (315aa)
2-nitropropane dioxygenase {ECO:0000313|EMBL:KIC92571.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
2-nitropropane dioxygenase; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-] rbh
2-nitropropane dioxygenase NPD n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PVA1_CHIPD rbh
scnpilot_expt_750_bf_scaffold_458_curated_25
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30607..31011
DNA (405bp) protein (135aa)
TonB-dependent receptor n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QQF8_9DELT
TonB-dependent receptor {ECO:0000313|EMBL:EPX63524.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
scnpilot_expt_750_bf_scaffold_458_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31614..32435
DNA (822bp) protein (274aa)
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6U7_NIAKG rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEV97950.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_458_curated_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32562..33599)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMM5_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF14659.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_458_curated_28
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33671..34213)
DNA (543bp) protein (181aa)
RNA methyltransferase {ECO:0000313|EMBL:KIC93370.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI78_NIAKG
scnpilot_expt_750_bf_scaffold_458_curated_29
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34449..35075
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:AIM36839.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4T9_9SPHI
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_expt_750_bf_scaffold_458_curated_30
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35158..36387
DNA (1230bp) protein (410aa)
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4T8_9SPHI rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EHQ28132.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
anti-FecI sigma factor FecR
Displaying items 1-30 of 36 in total

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