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scnpilot_expt_750_bf_scaffold_1397_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1397_curated_1
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..506)
DNA (504bp) protein (168aa)
hypothetical protein rbh
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S627_PEDSD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAE64144.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
scnpilot_expt_750_bf_scaffold_1397_curated_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(518..958)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34028.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1397_curated_3
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(963..1730)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M8_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK34027.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
chromosome partitioning ATPase rbh
scnpilot_expt_750_bf_scaffold_1397_curated_4
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1765..2286)
DNA (522bp) protein (174aa)
hypothetical protein rbh
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S630_PEDSD rbh
Uncharacterized protein {ECO:0000313|EMBL:ADY52133.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_expt_750_bf_scaffold_1397_curated_5
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2499..2930
DNA (432bp) protein (144aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S631_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:ADY52134.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_expt_750_bf_scaffold_1397_curated_6
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2939..4219
DNA (1281bp) protein (427aa)
Relaxase {ECO:0000313|EMBL:KFF20035.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
Relaxase/mobilization nuclease domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M5_9FLAO rbh
Relaxase/mobilization nuclease family protein rbh
scnpilot_expt_750_bf_scaffold_1397_curated_7
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4348..4722
DNA (375bp) protein (125aa)
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family n=3 Tax=Bacteroidetes RepID=F0S633_PEDSD
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EFK56953.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
scnpilot_expt_750_bf_scaffold_1397_curated_8
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4719..5318
DNA (600bp) protein (200aa)
heavy metal transport/detoxification protein rbh
Heavy metal transport/detoxification protein n=3 Tax=Bacteroidetes RepID=F0S634_PEDSD rbh
Heavy metal transporter {ECO:0000313|EMBL:KEQ31112.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
scnpilot_expt_750_bf_scaffold_1397_curated_9
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5724..7724
DNA (2001bp) protein (667aa)
Strain DSM 12611 Contig03, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54472.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
TraG family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M1_9FLAO rbh
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_1397_curated_10
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7863..8426
DNA (564bp) protein (188aa)
Transcriptional regulator, AraC family n=2 Tax=Sphingobacterium spiritivorum RepID=D7VNR6_9SPHI rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK57563.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
AraC family transcriptional regulator rbh
scnpilot_expt_750_bf_scaffold_1397_curated_11
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8442..8891)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXE5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI92386.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
scnpilot_expt_750_bf_scaffold_1397_curated_12
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8894..11236
DNA (2343bp) protein (781aa)
TonB-dependent receptor {ECO:0000313|EMBL:EEI92387.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
TonB-dependent receptor n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXE6_9SPHI rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
scnpilot_expt_750_bf_scaffold_1397_curated_13
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11272..11835
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXE7_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EEI92388.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1397_curated_14
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12100..12318
DNA (219bp) protein (73aa)
Copper-exporting ATPase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8X1_9FLAO
Copper-exporting ATPase {ECO:0000313|EMBL:EFK57567.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EFK57567.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Displaying 14 items

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