ggKbase home page

scnpilot_expt_750_bf_scaffold_413_curated_19

Organism: scnpilot_dereplicated_Sphingobacteriales_8

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(17313..17942)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC94833.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 209.0
  • Bit_score: 275
  • Evalue 7.90e-71
two component transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 208.0
  • Bit_score: 270
  • Evalue 5.70e-70
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIY2_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 208.0
  • Bit_score: 270
  • Evalue 1.80e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 630
ATGATAAGGATCCTTATAGCAGATGATCATGCCATTGTAAGAAAGGGACTGACGCAATTGATCAGGGATGAATTTGCCTCGGCAGAAATTGCTGAAGTAGGAGACGCCGAAGAGCTGATATCTAAAGTGTCGGATAAAGACTGGGATATCGTTGTATGCGATCTGAGCATGCCCGGGAGGAGTGGACTTGACGCTTTAAGGCAGATAAAGCAGATGCATCCTTCTTTACCGGTGCTGATAATGAGCATGCATGATGAAGATCAGTATGCCTTACGGGTATTGAAAGCAGGAGCTTCAGCCTACCTGGGGAAGGACAATATCCACGAAGATATTATTAAGGCCATACGCACTGTATTGCTCGGCAAAAAGTTTATCACTCCCTCTGTTGCTGAAAAATTAGCCCAGGCGCTTGAGGGCGATACCAATCAACTGCCTCACGAAAAATTATCGGACAGGGAGTTTGATGTGTTTAAACTACTGGCAGGAGGAAAAGCCGTGTCTGATATAGCCGACCAGCTTTCCCTGAGCGTCACTACGGTGAGCACATACCGGGCAAGGATACTCGAAAAGATGAATCTTAAATCAAATGCCGACCTTACCAGGTATGCGTTAAATAACAACCTGATATAA
PROTEIN sequence
Length: 210
MIRILIADDHAIVRKGLTQLIRDEFASAEIAEVGDAEELISKVSDKDWDIVVCDLSMPGRSGLDALRQIKQMHPSLPVLIMSMHDEDQYALRVLKAGASAYLGKDNIHEDIIKAIRTVLLGKKFITPSVAEKLAQALEGDTNQLPHEKLSDREFDVFKLLAGGKAVSDIADQLSLSVTTVSTYRARILEKMNLKSNADLTRYALNNNLI*