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scnpilot_expt_750_bf_scaffold_413_curated

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_413_curated_1
unknown

Not on your lists

comp(481..1155)
DNA (675bp) protein (225aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_413_curated_2
unknown

Not on your lists

comp(1276..1419)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_413_curated_3
unknown

Not on your lists

comp(1398..1508)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_413_curated_4
unknown

Not on your lists

comp(1540..2118)
DNA (579bp) protein (193aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_413_curated_5
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2215..2865)
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO71669.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X3N2_9PORP
hypothetical protein
scnpilot_expt_750_bf_scaffold_413_curated_6
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3098..3439)
DNA (342bp) protein (114aa)
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
hypothetical protein ACCM5_04167 id=2660179 bin=GWC2_Bacteroidetes_40_13 species=Acaryochloris sp. CCMEE 5410 genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
scnpilot_expt_750_bf_scaffold_413_curated_7
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3439..3813)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0N6W5_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EQB90594.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica 502.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_413_curated_8
unknown

Not on your lists

comp(4028..4474)
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_413_curated_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4727..5020)
DNA (294bp) protein (98aa)
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_expt_750_bf_scaffold_413_curated_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5421..5915)
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO41780.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_expt_750_bf_scaffold_413_curated_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6170..6688)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI00037A50EC
Uncharacterized protein {ECO:0000313|EMBL:KIC89096.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_expt_750_bf_scaffold_413_curated_12
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7036..7254)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL86401.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000362A80F
scnpilot_expt_750_bf_scaffold_413_curated_13
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7668..8798)
DNA (1131bp) protein (377aa)
integrase rbh
Integrase family protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZC0_HALH1 rbh
Integrase family protein {ECO:0000313|EMBL:AEE48415.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_expt_750_bf_scaffold_413_curated_14
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9171..12608)
DNA (3438bp) protein (1146aa)
Uncharacterized protein {ECO:0000313|EMBL:AEI48630.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EF19_RUNSL rbh
hypothetical protein rbh
scnpilot_expt_750_bf_scaffold_413_curated_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12685..13962)
DNA (1278bp) protein (426aa)
Oxidoreductase {ECO:0000313|EMBL:KIC89631.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
oxidoreductase domain-containing protein rbh
oxidoreductase n=1 Tax=Dyadobacter beijingensis RepID=UPI00038020A2 rbh
scnpilot_expt_750_bf_scaffold_413_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14558..15124)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381B3EF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98344.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_413_curated_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15190..16608)
DNA (1419bp) protein (473aa)
tRNA nucleotidyltransferase {ECO:0000313|EMBL:KIC93444.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374193C rbh
polynucleotide adenylyltransferase/metal dependent phosphohydrolase rbh
scnpilot_expt_750_bf_scaffold_413_curated_18
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16770..17156)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376D8B4
Response regulator
Response regulator {ECO:0000313|EMBL:AFH50198.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
scnpilot_expt_750_bf_scaffold_413_curated_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17313..17942)
DNA (630bp) protein (210aa)
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC94833.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIY2_NIAKG
scnpilot_expt_750_bf_scaffold_413_curated_20
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17917..20097)
DNA (2181bp) protein (727aa)
Tax=RBG_16_Ignavibacteria_34_14_curated
Signal transduction histidine kinase
Signal transduction histidine kinase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGA8_IGNAJ
scnpilot_expt_750_bf_scaffold_413_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20586..21215
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366615C
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AEW03522.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_413_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21228..21845
DNA (618bp) protein (206aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCR9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:AEW03523.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_413_curated_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22113..22700)
DNA (588bp) protein (196aa)
UPF0301 protein yqgE; K07735 putative transcriptional regulator
UPF0301 protein Niako_7310 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS0_NIAKG
UPF0301 protein Niako_7310 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_expt_750_bf_scaffold_413_curated_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22831..24162
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
integral membrane sensor signal transduction histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B321B rbh
scnpilot_expt_750_bf_scaffold_413_curated_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24137..25381)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003752AE5 rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Queuosine biosynthesis protein; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] rbh
scnpilot_expt_750_bf_scaffold_413_curated_26
unknown

Not on your lists

comp(25439..26518)
DNA (1080bp) protein (360aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_413_curated_27
unknown

Not on your lists

comp(27206..28987)
DNA (1782bp) protein (594aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_413_curated_28
unknown

Not on your lists

comp(29670..30047)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_413_curated_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30410..30865
DNA (456bp) protein (152aa)
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
MraZ protein; K03925 MraZ protein
Protein MraZ n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRD2_CHIPD
scnpilot_expt_750_bf_scaffold_413_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30994..31875
DNA (882bp) protein (294aa)
Ribosomal RNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] rbh
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS6_NIAKG rbh
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 56 in total

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