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SCNpilot_cont_300_bf_scaffold_2458_curated

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2458_curated_1
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..477
DNA (477bp) protein (159aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SAM dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
SAM dependent methyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCX1_PHEZH
SCNpilot_cont_300_bf_scaffold_2458_curated_2
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

474..1265
DNA (792bp) protein (264aa)
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family rbh
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKX0_CAUST rbh
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ADG11143.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_3
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1347..2345
DNA (999bp) protein (333aa)
hypothetical protein id=12557349 bin=CNBR_ACIDO species=Brevundimonas abyssalis genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD60587.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2459..2782
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AN40_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL34421.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2458_curated_5
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2779..3180)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQ66_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU14842.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2458_curated_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3220..5655)
DNA (2436bp) protein (812aa)
ATP-dependent helicase HrpB {ECO:0000313|EMBL:ABZ70720.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
ATP-dependent helicase HrpB n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T1G3_CAUSK rbh
ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_7
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(6210..7142)
DNA (933bp) protein (311aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY13116.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
SCNpilot_cont_300_bf_scaffold_2458_curated_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7436..8110
DNA (675bp) protein (225aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Zn-dependent hydrolase, glyoxylase n=1 Tax=Caulobacter sp. AP07 RepID=J2GJ00_9CAUL rbh
glyoxalase II family protein rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8210..8947
DNA (738bp) protein (246aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Caulobacter sp. AP07 RepID=J2ZT69_9CAUL rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJL22516.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
winged helix family two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_10
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8944..10299
DNA (1356bp) protein (452aa)
integral membrane sensor signal transduction histidine kinase rbh
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKX5_CAUST rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10383..11072
DNA (690bp) protein (230aa)
EF-hand domain-containing protein
EF-hand domain protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H3T4_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:AAK23164.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_12
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11069..13738)
DNA (2670bp) protein (890aa)
methyltransferase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003807EB6 rbh
methyltransferase rbh
Methyltransferase {ECO:0000313|EMBL:ABZ70711.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_13
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13886..14551)
DNA (666bp) protein (222aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009G21 RepID=B3T1E0_9ZZZZ
conserved exported hypothetical protein
SCNpilot_cont_300_bf_scaffold_2458_curated_trna_1
unknown

Not on your lists

14697..14784
DNA (88bp)
transferRNA
SCNpilot_cont_300_bf_scaffold_2458_curated_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14923..16971
DNA (2049bp) protein (683aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
peptidase M13 n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003698103 rbh
endothelin-converting protein 1 (EC:3.4.24.71); K07386 putative endopeptidase [EC:3.4.24.-] rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_15
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16993..17724)
DNA (732bp) protein (244aa)
Aminoglycoside N3'-acetyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXK9_9RHIZ rbh
Aminoglycoside N3'-acetyltransferase {ECO:0000313|EMBL:EIM28701.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
aminoglycoside 3-N-acetyltransferase (EC:2.3.1.81); K00662 aminoglycoside N3'-acetyltransferase [EC:2.3.1.81] rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_16
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17799..18557)
DNA (759bp) protein (253aa)
Glyoxalase/Bleomycin resistance protein/dioxygenase domain {ECO:0000313|EMBL:AIY41767.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
putative glyoxylase; K06996
Putative glyoxylase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MIR8_RHISN
SCNpilot_cont_300_bf_scaffold_2458_curated_17
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18636..19109
DNA (474bp) protein (158aa)
MarR family transcriptional regulator
MarR family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S254_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:AGH50090.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_2458_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19149..20546
DNA (1398bp) protein (466aa)
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAN9_9BRAD rbh
Drug:H+ antiporter-2 (14 Spanner) (DHA2) family drug resistance MFS transporter {ECO:0000313|EMBL:EKS39677.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
EmrB/QacA family drug resistance transporter rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_19
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20518..21306)
DNA (789bp) protein (263aa)
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXH6_CAUSK
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:ABZ71761.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_20
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21334..22296
DNA (963bp) protein (321aa)
transglutaminase domain-containing protein rbh
Transglutaminase domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXH7_CAUSK rbh
Transglutaminase domain protein {ECO:0000313|EMBL:ABZ71762.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_21
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22309..23115
DNA (807bp) protein (269aa)
Transglutaminase domain-containing protein {ECO:0000313|EMBL:GAN54004.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F20CAE rbh
transglutaminase-like enzymes, putative cysteine proteases rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_22
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23170..24657
DNA (1488bp) protein (496aa)
hfsE; HfsE rbh
HfsE n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9A5M2_CAUCR rbh
HfsE {ECO:0000313|EMBL:AAK24396.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_23
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24783..26228
DNA (1446bp) protein (482aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Caulobacter sp. AP07 RepID=J3A4Q6_9CAUL rbh
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:EJL26616.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hfsF; polysaccharide biosynthesis protein rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_24
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26389..27120
DNA (732bp) protein (244aa)
hfsG; glycosyl transferase rbh
Glycosyltransferase hfsG n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GZI5_CAUCN rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:AAK24398.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_25
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27117..27887
DNA (771bp) protein (257aa)
hfsH; oligosaccharide deacetylase HfsH rbh
Oligosaccharide deacetylase hfsH n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GZI6_CAUCN rbh
HfsH {ECO:0000313|EMBL:AAK24399.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_26
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27884..28507
DNA (624bp) protein (208aa)
50S ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H0C5_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:AAK24555.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2458_curated_27
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28504..29571)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0E8Q2_CAUCE rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ81868.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2458_curated_28
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29644..30939)
DNA (1296bp) protein (432aa)
Lipid A core-O-antigen ligase-like enyme n=1 Tax=Caulobacter sp. AP07 RepID=J3ABY9_9CAUL rbh
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:EJL29616.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
O-antigen polymerase rbh
SCNpilot_cont_300_bf_scaffold_2458_curated_29
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30936..31415)
DNA (480bp) protein (160aa)
hfsB; polysaccharide autokinase-like protein HfsB
Polysaccharide autokinase-related protein hfsB n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GZI8_CAUCN
HfsB {ECO:0000313|EMBL:AAK24401.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
Displaying 30 items

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