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SCNpilot_cont_300_bf_scaffold_5858_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5858_curated_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..346
DNA (345bp) protein (115aa)
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11
P-type conjugative transfer ATPase TrbB n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T9Q0_CAUSK
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ABZ74449.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_5858_curated_2
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(286..531)
DNA (246bp) protein (82aa)
UPI0003D006CE related cluster n=1 Tax=unknown RepID=UPI0003D006CE
XRE family transcriptional regulator {ECO:0000313|EMBL:ESZ64368.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
helix-turn-helix domain-containing protein
SCNpilot_cont_300_bf_scaffold_5858_curated_3
unknown

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602..814
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5858_curated_4
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(862..1545)
DNA (684bp) protein (228aa)
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7]
Error-prone DNA polymerase n=3 Tax=Sphingobium RepID=D4YY15_SPHJU
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_cont_300_bf_scaffold_5858_curated_5
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1601..4069)
DNA (2469bp) protein (823aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7]
Error-prone DNA polymerase n=3 Tax=Sphingobium RepID=D4YY15_SPHJU
SCNpilot_cont_300_bf_scaffold_5858_curated_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4114..4773
DNA (660bp) protein (220aa)
succinoglycan biosynthesis protein
Succinoglycan biosynthesis protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S646_9SPHN
Succinoglycan biosynthesis protein {ECO:0000313|EMBL:AGH51500.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_5858_curated_7
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4778..6172)
DNA (1395bp) protein (465aa)
Nucleotidyltransferase {ECO:0000313|EMBL:KIC53942.1}; Flags: Fragment;; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
nucleotidyltransferase/DNA polymerase involved in DNA repair rbh
Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFU6_MESAW rbh
SCNpilot_cont_300_bf_scaffold_5858_curated_8
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7034..7357
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EKC7_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ81582.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
SCNpilot_cont_300_bf_scaffold_5858_curated_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7388..8149)
DNA (762bp) protein (254aa)
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q138H2_RHOPS rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE39517.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Displaying 9 items

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