ggKbase home page

SCNpilot_cont_300_bf_scaffold_2814_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2814_curated_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1126)
DNA (1125bp) protein (375aa)
EAL domain-containing protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EH65_CAUCE rbh
EAL domain-containing protein {ECO:0000313|EMBL:ENZ80582.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
sensory box/GGDEF family protein rbh
SCNpilot_cont_300_bf_scaffold_2814_curated_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1646..3403
DNA (1758bp) protein (586aa)
N-acetylglucosaminyltransferase, putative (modular protein)
N-acetylglucosaminyltransferase, putative (Modular protein) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ASY9_AZOBR
N-acetylglucosaminyltransferase, putative (Modular protein) {ECO:0000313|EMBL:CCD00550.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_300_bf_scaffold_2814_curated_3
unknown

Not on your lists

3560..3919
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2814_curated_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3960..4691
DNA (732bp) protein (244aa)
Endonuclease III n=1 Tax=Caulobacter sp. AP07 RepID=J2QD59_9CAUL
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
HhH-GPD family protein; K10773 endonuclease III [EC:4.2.99.18]
SCNpilot_cont_300_bf_scaffold_2814_curated_5
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4688..7333)
DNA (2646bp) protein (882aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] rbh
Alanine--tRNA ligase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFE6_CAUST rbh
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2814_curated_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7623..8687)
DNA (1065bp) protein (355aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
recA; recombinase A; K03553 recombination protein RecA rbh
Protein RecA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHD9_PHEZH rbh
SCNpilot_cont_300_bf_scaffold_2814_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8872..9207)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QX64_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95618.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2814_curated_8
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10180..10674
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO40730.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REV2_PHEZH
Displaying 8 items

View Taxonomy