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SCNpilot_cont_300_bf_scaffold_7654_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_7654_curated_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18..734)
DNA (717bp) protein (239aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
transcriptional regulator n=1 Tax=Halomonas lutea RepID=UPI00036FE492
winged helix family two component transcriptional regulator
SCNpilot_cont_300_bf_scaffold_7654_curated_2
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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977..1768
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EHC4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ59413.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_7654_curated_3
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1926..3059
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HPQ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ63528.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
acyltransferase 3
SCNpilot_cont_300_bf_scaffold_7654_curated_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3159..3932
DNA (774bp) protein (258aa)
Metallophosphoesterase {ECO:0000313|EMBL:EZP55024.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
metallophosphoesterase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B57634
metallophosphoesterase; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16]
SCNpilot_cont_300_bf_scaffold_7654_curated_5
unknown

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3929..4546
DNA (618bp) protein (206aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_7654_curated_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5326..5586
DNA (261bp) protein (87aa)
c4-dicarboxylate transporter/malic acid transport protein; K03304 tellurite resistance/dicarboxylate transporter, TDT family
C4-dicarboxylate transporter/malic acid transport protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAL4_VARPE
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:ADU35124.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_7654_curated_7
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(5552..6031)
DNA (480bp) protein (160aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZJX8_TERRK
Uncharacterized protein {ECO:0000313|EMBL:AFL89546.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_300_bf_scaffold_7654_curated_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6100..7377)
DNA (1278bp) protein (426aa)
homogentisate 1,2-dioxygenase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037D221C rbh
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015614};; Homogentisate oxygenase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisic acid oxidase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisicase {ECO:0000256|HAMAP-Rule:MF_00334}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;
homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] rbh
SCNpilot_cont_300_bf_scaffold_7654_curated_9
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7392..8222)
DNA (831bp) protein (277aa)
PAS/PAC sensor hybrid histidine kinase (Fragment) n=1 Tax=Sphingomonas sp. LH128 RepID=J8VUH9_9SPHN rbh
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EJU11096.1}; Flags: Fragment;; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
PAS/PAC sensor hybrid histidine kinase
SCNpilot_cont_300_bf_scaffold_7654_curated_10
unknown

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8615..9061
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_7654_curated_11
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9614..10789
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6B520
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL88539.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
Displaying 11 items

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