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SCNpilot_cont_300_bf_scaffold_2923_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2923_curated_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..906)
DNA (906bp) protein (302aa)
serine protease (EC:3.4.21.-); K07001 NTE family protein rbh
Serine protease n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H5B4_CAUCN rbh
Uncharacterized protein {ECO:0000313|EMBL:AAK25345.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2923_curated_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(911..1708)
DNA (798bp) protein (266aa)
PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C0FC39 rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:ENZ80364.1}; Flags: Precursor;; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] rbh
SCNpilot_cont_300_bf_scaffold_2923_curated_3
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1775..2542)
DNA (768bp) protein (256aa)
UPF0246 protein OR37_03780 n=1 Tax=Caulobacter crescentus OR37 RepID=R0CVH6_CAUCE rbh
UPF0246 protein OR37_03780 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein; K09861 hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_2923_curated_4
unknown

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2793..3086
DNA (294bp) protein (98aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2923_curated_5
unknown

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3243..3446
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2923_curated_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3986..4393
DNA (408bp) protein (136aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Putative YtrA (Transcriptional regulator YtrA) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SXN9_9BRAD
YtrA (transcriptional regulator YtrA)
SCNpilot_cont_300_bf_scaffold_2923_curated_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4903..5247
DNA (345bp) protein (115aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SPFH domain, Band 7 family protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SXP0_9BRAD
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2923_curated_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5650..6576
DNA (927bp) protein (309aa)
Hydrolase alpha/beta fold family protein {ECO:0000313|EMBL:KFC63083.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4QR92_9CAUL rbh
peptidase S15; K06889 rbh
SCNpilot_cont_300_bf_scaffold_2923_curated_9
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6573..7325
DNA (753bp) protein (251aa)
hypothetical protein rbh
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus K02 RepID=I0BFU6_9BACL rbh
Uncharacterized protein {ECO:0000313|EMBL:AFC29032.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
SCNpilot_cont_300_bf_scaffold_2923_curated_10
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7322..8269)
DNA (948bp) protein (316aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein rbh
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHG3_CAUST rbh
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2923_curated_11
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8362..10116
DNA (1755bp) protein (585aa)
acyl-CoA dehydrogenase domain-containing protein rbh
Acyl-CoA dehydrogenase domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHG0_CAUST rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADG08818.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2923_curated_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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10238..11170
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003700228 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ84051.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_300_bf_scaffold_2923_curated_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11199..12173
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003700228
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84051.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_cont_300_bf_scaffold_2923_curated_14
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12246..12584)
DNA (339bp) protein (113aa)
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNQ2_9SPHN
SCNpilot_cont_300_bf_scaffold_2923_curated_15
Arundo donax, Arundo, Poales, commelinids, Streptophyta, Viridiplantae

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12743..13162
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:JAF48766.1}; TaxID=35708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Arundinoideae; Arundineae; Arundo.;" source="Arundo donax (Giant reed) (Donax arundinaceus).;"
Uncharacterized protein n=1 Tax=Zea mays RepID=C0P8E9_MAIZE
SCNpilot_cont_300_bf_scaffold_2923_curated_16
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13219..13590
DNA (372bp) protein (124aa)
hypothetical protein; K07735 putative transcriptional regulator
UPF0301 protein Cseg_0295 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHF6_CAUST
UPF0301 protein Cseg_0295 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2923_curated_17
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13868..16258
DNA (2391bp) protein (797aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4P1H5_9CAUL rbh
TonB dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_300_bf_scaffold_2923_curated_18
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16268..17539
DNA (1272bp) protein (424aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Isopenicillin N epimerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBT6_9SPHN rbh
Isopenicillin N epimerase (EC:5.1.1.17) rbh
SCNpilot_cont_300_bf_scaffold_2923_curated_19
unknown

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comp(17543..17641)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 19 items

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