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SCNpilot_cont_300_bf_scaffold_2502_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2502_curated_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..2780
DNA (2778bp) protein (926aa)
aminopeptidase N rbh
Aminopeptidase N n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPP1_CAUST rbh
Aminopeptidase N {ECO:0000313|EMBL:ADG12464.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2777..3643)
DNA (867bp) protein (289aa)
PAS-family sensor histidine kinase (EC:2.7.13.3) rbh
PAS-family sensor histidine kinase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H679_CAUCN rbh
Response regulator/sensor histidine kinase {ECO:0000313|EMBL:AAK25522.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_3
unknown

Not on your lists

3969..4697
DNA (729bp) protein (243aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2502_curated_4
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4846..5223
DNA (378bp) protein (126aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T249_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ69218.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5253..5651
DNA (399bp) protein (133aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H677_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:AAK25520.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5757..6374
DNA (618bp) protein (206aa)
PREDICTED: superoxide dismutase [Fe]-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C143C5 rbh
superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_7
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6471..6641
DNA (171bp) protein (57aa)
hypothetical protein
UPF0391 membrane protein Cseg_4044 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPN3_CAUST
UPF0391 membrane protein Cseg_4044 {ECO:0000256|HAMAP-Rule:MF_01361}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_8
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6709..6936)
DNA (228bp) protein (76aa)
metallophosphoesterase
Metallophosphoesterase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T252_CAUSK
Metallophosphoesterase {ECO:0000313|EMBL:ABZ69221.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_9
unknown

Not on your lists

7193..7534
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2502_curated_10
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7408..8379)
DNA (972bp) protein (324aa)
Sphingosine/diacylglycerol kinase-like enzyme n=1 Tax=Caulobacter crescentus OR37 RepID=R0EMP9_CAUCE rbh
Sphingosine/diacylglycerol kinase-like enzyme {ECO:0000313|EMBL:ENZ82357.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
diacylglycerol kinase catalytic region; K07029 rbh
SCNpilot_cont_300_bf_scaffold_2502_curated_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8390..8743)
DNA (354bp) protein (118aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_2502_curated_12
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8864..9199
DNA (336bp) protein (112aa)
17 kDa surface antigen
17 kDa surface antigen n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T254_CAUSK
17 kDa surface antigen {ECO:0000313|EMBL:ABZ69223.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_13
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9305..9760
DNA (456bp) protein (152aa)
Outer membrane protein/peptidoglycan-associated lipoprotein n=1 Tax=Caulobacter sp. AP07 RepID=J2QBC7_9CAUL
Outer membrane protein/peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EJL37402.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
OmpA/MotB domain-containing protein
SCNpilot_cont_300_bf_scaffold_2502_curated_14
unknown

Not on your lists

10147..10341
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2502_curated_15
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10354..10596
DNA (243bp) protein (81aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPM7_CAUST
Uncharacterized protein {ECO:0000313|EMBL:ADG12450.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_16
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10671..10844)
DNA (174bp) protein (58aa)
UPF0391 membrane protein HY36_02975 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantica.;"
hypothetical protein
UPF0391 membrane protein HNE_2348 n=2 Tax=Hyphomonas neptunium RepID=Y2348_HYPNA
SCNpilot_cont_300_bf_scaffold_2502_curated_17
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10984..11787)
DNA (804bp) protein (268aa)
two-component response regulator rbh
Putative RNA polymerase, sigma 70 family subunit n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T258_CAUSK rbh
Putative RNA polymerase, sigma 70 family subunit {ECO:0000313|EMBL:ABZ69227.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_18
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11856..12203
DNA (348bp) protein (116aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T259_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ69228.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_19
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12206..12811
DNA (606bp) protein (202aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T260_CAUSK rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABZ69229.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_20
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12808..13983
DNA (1176bp) protein (392aa)
Signal transduction histidine kinase n=1 Tax=Caulobacter sp. AP07 RepID=J2QBC1_9CAUL rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EJL37397.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
signal transduction histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_2502_curated_21
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14022..14420
DNA (399bp) protein (133aa)
Signal transduction histidine kinase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EK86_CAUCE
Signal transduction histidine kinase {ECO:0000313|EMBL:ENZ82364.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_2502_curated_22
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14536..14673
DNA (138bp) protein (46aa)
entericidin EcnAb
Entericidin EcnAB n=2 Tax=Caulobacter RepID=D5VPM2_CAUST
Entericidin EcnAB {ECO:0000313|EMBL:ADG12445.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_23
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14808..14945
DNA (138bp) protein (46aa)
entericidin EcnAb
Entericidin EcnAB n=2 Tax=Caulobacter RepID=D5VPM2_CAUST
Entericidin EcnAB {ECO:0000313|EMBL:ADG12445.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_24
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14942..15724)
DNA (783bp) protein (261aa)
AraC family transcriptional regulator {ECO:0000313|EMBL:AJR26885.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V470_SPHWW rbh
SCNpilot_cont_300_bf_scaffold_2502_curated_25
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15825..17039
DNA (1215bp) protein (405aa)
Fosmidomycin resistance protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IDF6_9SPHN rbh
Fosmidomycin resistance protein {ECO:0000313|EMBL:EQB07664.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
major facilitator transporter; K08223 MFS transporter, FSR family, fosmidomycin resistance protein rbh
SCNpilot_cont_300_bf_scaffold_2502_curated_26
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17053..17871)
DNA (819bp) protein (273aa)
Methylase of chemotaxis methyl-accepting protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AU23_9CAUL rbh
Methylase of chemotaxis methyl-accepting protein {ECO:0000313|EMBL:EJL37394.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
CheR-type MCP methyltransferase (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] rbh
SCNpilot_cont_300_bf_scaffold_2502_curated_27
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17868..18218)
DNA (351bp) protein (117aa)
chemotaxis receiver domain-containing protein CheYIV; K03413 two-component system, chemotaxis family, response regulator CheY
Response regulator receiver protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EMQ6_CAUCE
Response regulator receiver protein {ECO:0000313|EMBL:ENZ82367.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
SCNpilot_cont_300_bf_scaffold_2502_curated_28
unknown

Not on your lists

18471..18758
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2502_curated_29
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19059..19247
DNA (189bp) protein (63aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T267_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ69236.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2502_curated_30
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19244..20014
DNA (771bp) protein (257aa)
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Caulobacter sp. AP07 RepID=J2GMH4_9CAUL rbh
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EJL23873.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.25 3.1.3.7); K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
Displaying items 1-30 of 45 in total

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