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SCNpilot_cont_300_bf_scaffold_1400_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1400_curated_1
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2746)
DNA (2745bp) protein (915aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4P116_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ87672.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC460.;"
putative calcium-binding protein
SCNpilot_cont_300_bf_scaffold_1400_curated_2
unknown

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2993..3757
DNA (765bp) protein (255aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1400_curated_3
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3856..4458
DNA (603bp) protein (201aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C0CC0
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1400_curated_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4461..4877)
DNA (417bp) protein (139aa)
Acetyltransferase, GNAT family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZY45_9PROT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHM02093.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
GCN5-related N-acetyltransferase
SCNpilot_cont_300_bf_scaffold_1400_curated_5
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4874..5626)
DNA (753bp) protein (251aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
glutathione S-transferase domain-containing protein; K04097 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T5Y3_CAUSK
SCNpilot_cont_300_bf_scaffold_1400_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5734..6504)
DNA (771bp) protein (257aa)
Uncharacterized protein {ECO:0000313|EMBL:KDP76182.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A5U5_RHIFH
SCNpilot_cont_300_bf_scaffold_1400_curated_7
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6632..7945
DNA (1314bp) protein (438aa)
PREDICTED: uncharacterized protein C8E4.05c-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17EF0 rbh
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
SCNpilot_cont_300_bf_scaffold_1400_curated_8
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8041..8589
DNA (549bp) protein (183aa)
DNA glycosylase {ECO:0000313|EMBL:AJC19081.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
G:T/U mismatch-specific DNA glycosylase-like protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WYB7_9BURK
uracil-DNA glycosylase superfamily protein
SCNpilot_cont_300_bf_scaffold_1400_curated_9
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8586..9578)
DNA (993bp) protein (331aa)
Uncharacterized protein {ECO:0000313|EMBL:AIY43130.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WQJ3_9GAMM
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1400_curated_10
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9667..9984)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HB14_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL32708.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1400_curated_11
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10220..10978
DNA (759bp) protein (253aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T5Y9_CAUSK rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1400_curated_12
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10978..11208
DNA (231bp) protein (77aa)
phosphoribosylformylglycinamidine synthase PurS; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase, purS n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFI5_CAUST
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caul
SCNpilot_cont_300_bf_scaffold_1400_curated_13
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11205..11867
DNA (663bp) protein (221aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VFI0_CAUST rbh
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=509190 species=
SCNpilot_cont_300_bf_scaffold_1400_curated_14
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12008..12805)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000379E2A3 rbh
Hydrolase or acyltransferase {ECO:0000313|EMBL:AIJ23723.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hydrolase or acyltransferase rbh
SCNpilot_cont_300_bf_scaffold_1400_curated_15
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12814..13260)
DNA (447bp) protein (149aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REP5_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:ACG78571.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1400_curated_16
unknown

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13436..13732
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1400_curated_17
unknown

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13742..13903
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1400_curated_18
unknown

Not on your lists

14270..14464
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1400_curated_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15013..16005)
DNA (993bp) protein (331aa)
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG88611.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
xylose isomerase id=12557046 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
xylose isomerase domain-containing protein
SCNpilot_cont_300_bf_scaffold_1400_curated_20
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16153..16389)
DNA (237bp) protein (79aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QNE4_BRESC
SCNpilot_cont_300_bf_scaffold_1400_curated_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16551..16820
DNA (270bp) protein (90aa)
transglycosylase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5EE94
Transglycosylase {ECO:0000313|EMBL:AIT05150.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
transglycosylase-associated protein
SCNpilot_cont_300_bf_scaffold_1400_curated_22
unknown

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17091..17327
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1400_curated_23
unknown

Not on your lists

17542..18144
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1400_curated_24
unknown

Not on your lists

18231..18362
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 24 items

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