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SCNpilot_cont_300_bf_scaffold_1908_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1908_curated_1
unknown

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comp(1..306)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1908_curated_2
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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631..1365
DNA (735bp) protein (245aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
flgH; flagellar basal body L-ring protein; K02393 flagellar L-ring protein precursor FlgH rbh
Flagellar L-ring protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=FLGH_CAUCR rbh
SCNpilot_cont_300_bf_scaffold_1908_curated_3
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1426..1905
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AFH1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL31086.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1908_curated_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2021..3022
DNA (1002bp) protein (334aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VGD8_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:ABQ71354.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_1908_curated_5
Asticcacaulis biprosthecium, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3109..4149
DNA (1041bp) protein (347aa)
Protein tas n=1 Tax=Asticcacaulis biprosthecum C19 RepID=F4QKH5_9CAUL rbh
Protein tas {ECO:0000313|EMBL:EGF92127.1}; TaxID=715226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis biprosthecum C19.;"
aldo/keto reductase rbh
SCNpilot_cont_300_bf_scaffold_1908_curated_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4283..6202)
DNA (1920bp) protein (640aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; EC=2.2.1.7 {ECO:0000255|HAMAP-Rule:MF_00315};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00315}; Short=DXP synthase {ECO:0000255|HAMAP-Rule:MF_00315};; Short=DXPS {ECO:0000255|HAMAP-Rule:MF_00315};; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=DXS_CAUCN rbh
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7); K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] rbh
SCNpilot_cont_300_bf_scaffold_1908_curated_7
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6223..7116)
DNA (894bp) protein (298aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
dimethylallyltransferase/geranyltranstransferase (EC:2.5.1.1); K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] rbh
Dimethylallyltransferase/Geranyltranstransferase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GXC5_CAUCN rbh
SCNpilot_cont_300_bf_scaffold_1908_curated_8
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7116..7358)
DNA (243bp) protein (81aa)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Caulobacter crescentus OR37 RepID=R0D1E8_CAUCE
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
xseB; exodeoxyribonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
SCNpilot_cont_300_bf_scaffold_1908_curated_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7403..8020)
DNA (618bp) protein (206aa)
phosphoglycerate mutase
Phosphoglycerate mutase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3Y1_CAUSK
Phosphoglycerate mutase {ECO:0000313|EMBL:ABZ72445.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1908_curated_10
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8020..8910)
DNA (891bp) protein (297aa)
histone deacetylase superfamily protein rbh
Histone deacetylase superfamily n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3Y2_CAUSK rbh
Histone deacetylase superfamily {ECO:0000313|EMBL:ABZ72446.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1908_curated_11
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8939..9499
DNA (561bp) protein (187aa)
Acetyltransferase, GNAT family n=2 Tax=Bacteria RepID=B4WBM9_9CAUL
GNAT family acetyltransferase {ECO:0000313|EMBL:KDP95776.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
putative acetyltransferase
SCNpilot_cont_300_bf_scaffold_1908_curated_12
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9496..9981
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T319_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:EGP45334.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1908_curated_13
unknown

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comp(10069..10374)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1908_curated_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10489..12015)
DNA (1527bp) protein (509aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] rbh
Phage SPO1 DNA polymerase-related protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VM34_CAUST rbh
SCNpilot_cont_300_bf_scaffold_1908_curated_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12015..12296)
DNA (282bp) protein (94aa)
Radical SAM domain protein {ECO:0000313|EMBL:CDX41054.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
radical SAM protein
Radical SAM domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAB1_MESCW
SCNpilot_cont_300_bf_scaffold_1908_curated_16
unknown

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12530..12727
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1908_curated_17
unknown

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13073..13225
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1908_curated_18
unknown

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13539..13634
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 18 items

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