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SCNpilot_cont_300_bf_scaffold_2307_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2307_curated_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..703
DNA (702bp) protein (234aa)
Thioredoxin domain-containing protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H554_9CAUL rbh
Thioredoxin domain-containing protein {ECO:0000313|EMBL:EJL37975.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
thioredoxin; K05838 putative thioredoxin rbh
SCNpilot_cont_300_bf_scaffold_2307_curated_2
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

726..1382
DNA (657bp) protein (219aa)
peptidase S16 lon domain-containing protein; K07157 rbh
Peptidase S16 lon domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T1U8_CAUSK rbh
Peptidase S16 lon domain protein {ECO:0000313|EMBL:ABZ73709.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2307_curated_3
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1394..1597
DNA (204bp) protein (68aa)
hypothetical protein; K09791 hypothetical protein
UPF0434 protein CCNA_00107 n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Y107_CAUCN
UPF0434 protein CC_0108 {ECO:0000255|HAMAP-Rule:MF_01187}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2307_curated_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1563..2504)
DNA (942bp) protein (314aa)
esterase/lipase
Esterase/lipase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGE9_PHEZH
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_2307_curated_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2554..2943)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL30404.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Glyoxalase family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNA0_9RHIZ
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_2307_curated_6
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2993..3886)
DNA (894bp) protein (298aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Caulobacter sp. AP07 RepID=J2FTN3_9CAUL rbh
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:EJL20490.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] rbh
SCNpilot_cont_300_bf_scaffold_2307_curated_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4765..6687
DNA (1923bp) protein (641aa)
DNA segregation ATPase, FtsK/SpoIIIE family n=1 Tax=Caulobacter sp. AP07 RepID=J2ZWM7_9CAUL rbh
DNA segregation ATPase, FtsK/SpoIIIE family {ECO:0000313|EMBL:EJL23746.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family rbh
SCNpilot_cont_300_bf_scaffold_2307_curated_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6822..7448
DNA (627bp) protein (209aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Outer membrane lipoprotein-sorting protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EBG4_CAUCE
lolA; outer membrane lipoprotein carrier protein LolA
SCNpilot_cont_300_bf_scaffold_2307_curated_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7670..8476
DNA (807bp) protein (269aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C172A0 rbh
exodeoxyribonuclease III Xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
SCNpilot_cont_300_bf_scaffold_2307_curated_10
Acinetobacter sp. CIP 102143, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8473..8700
DNA (228bp) protein (76aa)
Quaternary ammonium compound-resistance protein qacF n=5 Tax=Acinetobacter RepID=N8U5H7_9GAMM
Quaternary ammonium compound-resistance protein qacF {ECO:0000313|EMBL:ENX62715.1}; TaxID=1144666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. CIP 102143.;"
emrE; Ethidium bromide-methyl viologen resistance protein EmrE
SCNpilot_cont_300_bf_scaffold_2307_curated_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9572..10225)
DNA (654bp) protein (218aa)
hypothetical protein; K06997 rbh
Predicted enzyme with a TIM-barrel fold n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCZ0_PHEZH rbh
Predicted enzyme with a TIM-barrel fold {ECO:0000313|EMBL:ACG79922.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_2307_curated_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10259..10834
DNA (576bp) protein (192aa)
thiamine monophosphate synthase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00035DD2FD
thiE; thiamine monophosphate synthase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine monophosphate synthase {ECO:0000313|EMBL:ACG79923.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_2307_curated_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10837..11280)
DNA (444bp) protein (148aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T6E9_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ74152.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2307_curated_14
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11541..12035
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EN05_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ82467.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2307_curated_15
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12072..13190
DNA (1119bp) protein (373aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=SYL_CAUCN
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_00049};; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
Displaying 15 items

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