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SCNpilot_cont_300_bf_scaffold_1183_curated

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1183_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..246
DNA (246bp) protein (82aa)
excinuclease ABC subunit C n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B4338E
GIY-YIG nuclease superfamily protein {ECO:0000313|EMBL:AKH44220.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
excinuclease ABC subunit C
SCNpilot_cont_300_bf_scaffold_1183_curated_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

542..817
DNA (276bp) protein (92aa)
hypothetical protein; K09982 hypothetical protein
UPF0386 protein CCNA_00226 n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Y226_CAUCN
UPF0386 protein CCNA_00226 {ECO:0000255|HAMAP-Rule:MF_00827}; TaxID=565050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain NA1000 / CB15N).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_3
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1384..2064
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CXR3_CAUCE rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ81105.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_1183_curated_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2061..2510)
DNA (450bp) protein (150aa)
Putative thiol-disulphide oxidoreductase DCC (Modular protein) n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EID9_9RHIZ
Putative thiol-disulphide oxidoreductase DCC (Modular protein) {ECO:0000313|EMBL:CCV04157.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
putative thiol-disulfide oxidoreductase DCC
SCNpilot_cont_300_bf_scaffold_1183_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2593..2970
DNA (378bp) protein (126aa)
glyoxalase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C222C
Glyoxalase {ECO:0000313|EMBL:AHF87648.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1183_curated_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3047..4156
DNA (1110bp) protein (370aa)
Multimeric flavodoxin WrbA n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV06_9RHIZ rbh
Multimeric flavodoxin WrbA {ECO:0000313|EMBL:EIM27798.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
NADPH-dependent FMN reductase rbh
SCNpilot_cont_300_bf_scaffold_1183_curated_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4176..5150)
DNA (975bp) protein (325aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Caulobacter sp. AP07 RepID=J3AS54_9CAUL rbh
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:EJL36289.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
PDZ/DHR/GLGF domain-containing protein rbh
SCNpilot_cont_300_bf_scaffold_1183_curated_8
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5235..5798)
DNA (564bp) protein (188aa)
methyltransferase; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
Methyltransferase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T201_CAUSK
Methyltransferase {ECO:0000313|EMBL:ABZ73762.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5803..6444)
DNA (642bp) protein (214aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T200_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ73761.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_10
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6503..8110)
DNA (1608bp) protein (536aa)
Pseudouridine synthase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EDW1_CAUCE rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
ribosomal large subunit pseudouridine synthase B (EC:4.2.1.70); K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] rbh
SCNpilot_cont_300_bf_scaffold_1183_curated_11
unknown

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8571..9251
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B755E0
SCNpilot_cont_300_bf_scaffold_1183_curated_12
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9255..9380)
DNA (126bp) protein (42aa)
PREDICTED: glutathione S-transferase domain-containing protein DDB_G0280881-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18574
Glutathione S-transferase {ECO:0000313|EMBL:KIC58649.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical glutathione S-transferase like protein; K00799 glutathione S-transferase [EC:2.5.1.18]
SCNpilot_cont_300_bf_scaffold_1183_curated_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9393..9959)
DNA (567bp) protein (189aa)
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase domain n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T1F3_CAUSK rbh
Glutathione S-transferase domain {ECO:0000313|EMBL:ABZ70710.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_14
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10031..10624)
DNA (594bp) protein (198aa)
N-acetyltransferase GCN5
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Caulobacter crescentus OR37 RepID=R0CWQ1_CAUCE
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:ENZ80730.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
SCNpilot_cont_300_bf_scaffold_1183_curated_15
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10624..11049)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EJA4_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ82069.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1183_curated_16
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11095..11514)
DNA (420bp) protein (140aa)
glyoxalase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003710160
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJL34722.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_300_bf_scaffold_1183_curated_17
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11688..11975
DNA (288bp) protein (96aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
groES; heat shock protein Co-chaperonin,HSP10; K04078 chaperonin GroES
10 kDa chaperonin n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAJ2_PHEZH
SCNpilot_cont_300_bf_scaffold_1183_curated_18
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12029..13666
DNA (1638bp) protein (546aa)
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL rbh
60 kDa chaperonin n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAJ3_PHEZH rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_19
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14239..15645
DNA (1407bp) protein (469aa)
Porin {ECO:0000313|EMBL:KHL25471.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
Phosphate-selective porin O and P family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXL6_9SPHN rbh
putative porin rbh
SCNpilot_cont_300_bf_scaffold_1183_curated_20
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15724..16110)
DNA (387bp) protein (129aa)
PREDICTED: 50S ribosomal protein L12, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1B328
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
SCNpilot_cont_300_bf_scaffold_1183_curated_21
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16165..16683)
DNA (519bp) protein (173aa)
PREDICTED: 50S ribosomal protein L10, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18A03
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_22
Pseudomonas syringae group genomosp. 3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16994..17371)
DNA (378bp) protein (126aa)
Zinc-containing alcohol dehydrogenase superfamily protein n=1 Tax=Pseudomonas syringae pv. maculicola str. ES4326 RepID=F3HPA1_PSEYM
Zinc-containing alcohol dehydrogenase superfamily protein {ECO:0000313|EMBL:EGH61171.1}; TaxID=629265 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae pv. maculicola str. ES4326.;"
zinc-containing alcohol dehydrogenase superfamily protein; K13979 uncharacterized zinc-type alcohol dehydrogenase-like protein [EC:1.-.-.-]
SCNpilot_cont_300_bf_scaffold_1183_curated_23
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18385..18684
DNA (300bp) protein (100aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QNB8_BRESC
Uncharacterized protein {ECO:0000313|EMBL:ADL00319.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_24
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18848..19738
DNA (891bp) protein (297aa)
RNA polymerase sigma factor RpoH n=1 Tax=Caulobacter crescentus OR37 RepID=R0E6I1_CAUCE rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
RNA polymerase sigma 32 factor subunit RpoH; K03089 RNA polymerase sigma-32 factor rbh
SCNpilot_cont_300_bf_scaffold_1183_curated_25
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19802..20074)
DNA (273bp) protein (91aa)
Alpha/beta hydrolase {ECO:0000313|EMBL:KDP93886.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
Alpha/beta hydrolase family n=1 Tax=uncultured organism RepID=T1W9S0_9ZZZZ
alpha/beta hydrolase
SCNpilot_cont_300_bf_scaffold_1183_curated_26
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20092..20442)
DNA (351bp) protein (117aa)
Alpha/beta hydrolase {ECO:0000313|EMBL:KDP93886.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZL36_TERRK
SCNpilot_cont_300_bf_scaffold_1183_curated_27
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20483..21475)
DNA (993bp) protein (331aa)
bioB; biotin synthase; K01012 biotin synthetase [EC:2.8.1.6] rbh
Biotin synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=BIOB_PHEZH rbh
Biotin synthase {ECO:0000255|HAMAP-Rule:MF_01694}; EC=2.8.1.6 {ECO:0000255|HAMAP-Rule:MF_01694};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_28
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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21570..23030
DNA (1461bp) protein (487aa)
adenylate cyclase
Adenylate cyclase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T1Y3_CAUSK
Adenylate cyclase {ECO:0000313|EMBL:ABZ73744.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_29
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23110..24501
DNA (1392bp) protein (464aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] rbh
Adenosylhomocysteinase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=SAHH_CAUCR rbh
Adenosylhomocysteinase {ECO:0000255|HAMAP-Rule:MF_00563}; EC=3.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00563};; S-adenosyl-L-homocysteine hydrolase {ECO:0000255|HAMAP-Rule:MF_00563}; Short=AdoHcyase {ECO:0000255|HAMAP-Rule:MF_00563};; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_1183_curated_30
unknown

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24682..24858
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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