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SCNpilot_cont_300_bf_scaffold_2007_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2007_curated_1
unknown

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3..137
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2007_curated_2
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(170..652)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IWR2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB33240.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2007_curated_3
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(779..2332)
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035ED07C rbh
Uncharacterized protein {ECO:0000313|EMBL:EJT05834.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
monooxygenase FAD-binding protein rbh
SCNpilot_cont_300_bf_scaffold_2007_curated_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2569..3600
DNA (1032bp) protein (344aa)
aldo/keto reductase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036ECD2E rbh
Aldo/keto reductase {ECO:0000313|EMBL:AJP70722.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
aldo/keto reductase rbh
SCNpilot_cont_300_bf_scaffold_2007_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3659..4021
DNA (363bp) protein (121aa)
ArsR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036F09F3
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHF82926.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
HTH family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2007_curated_6
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4002..4508
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q3K9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM79445.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
Activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_300_bf_scaffold_2007_curated_7
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4551..4931
DNA (381bp) protein (127aa)
Ethyl tert-butyl ether degradation protein EthD {ECO:0000313|EMBL:KAK49234.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
Ethyl tert-butyl ether degradation protein EthD n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DJY1_9PSED
SCNpilot_cont_300_bf_scaffold_2007_curated_8
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4933..6492)
DNA (1560bp) protein (520aa)
GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] rbh
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKL8_CAUST rbh
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK00
SCNpilot_cont_300_bf_scaffold_2007_curated_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6524..7795)
DNA (1272bp) protein (424aa)
sun; tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] rbh
tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9R6_PHEZH rbh
tRNA and rRNA cytosine-C5-methylase (RNA methyltransferase) protein {ECO:0000313|EMBL:ACG77830.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_2007_curated_10
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7795..8190)
DNA (396bp) protein (132aa)
Putative membrane protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CYN2_CAUCE
Putative membrane protein {ECO:0000313|EMBL:ENZ81395.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2007_curated_11
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8211..9503)
DNA (1293bp) protein (431aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] rbh
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKM1_CAUST rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7
Displaying 11 items

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