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SCNpilot_cont_300_bf_scaffold_1299_curated

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1299_curated_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..492)
DNA (492bp) protein (164aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=KCY_CAUCN
Cytidylate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000255|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000255|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CMP kinase {ECO:0000255|HAMAP-Rule:MF_00238};; TaxID=565050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain NA1000 / CB15N).;"
SCNpilot_cont_300_bf_scaffold_1299_curated_2
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(495..1847)
DNA (1353bp) protein (451aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPR5_CAUST rbh
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;
SCNpilot_cont_300_bf_scaffold_1299_curated_3
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1932..2438
DNA (507bp) protein (169aa)
TIGR02300 family protein n=1 Tax=Caulobacter sp. AP07 RepID=J2P3Z2_9CAUL
TIGR02300 family protein {ECO:0000313|EMBL:EJL21697.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1299_curated_trna_1
unknown

Not on your lists

2538..2610
DNA (73bp)
transferRNA
SCNpilot_cont_300_bf_scaffold_1299_curated_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3392..3874)
DNA (483bp) protein (161aa)
Cold shock protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CVN8_CAUCE
Cold shock protein {ECO:0000313|EMBL:ENZ80425.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_300_bf_scaffold_1299_curated_trna_2
unknown

Not on your lists

comp(4184..4257)
DNA (74bp)
transferRNA
SCNpilot_cont_300_bf_scaffold_1299_curated_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4600..6195
DNA (1596bp) protein (532aa)
Gamma-glutamyltransferase 1 n=1 Tax=Caulobacter crescentus OR37 RepID=R0EJ79_CAUCE rbh
Gamma-glutamyltransferase 1 {ECO:0000313|EMBL:ENZ82044.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ENZ82044.1};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] rbh
SCNpilot_cont_300_bf_scaffold_1299_curated_6
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6192..7715)
DNA (1524bp) protein (508aa)
Signal transduction histidine kinase n=1 Tax=Caulobacter sp. AP07 RepID=J2GQY6_9CAUL rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_cont_300_bf_scaffold_1299_curated_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7727..8467)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AJF7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL32771.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1299_curated_8
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8464..9513)
DNA (1050bp) protein (350aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] rbh
Dihydroorotate dehydrogenase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VEA2_CAUST rbh
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00054567}; EC=1.3.-.- {ECO:0000256|SAAS:SAAS00276934};; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1299_curated_9
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9510..9851)
DNA (342bp) protein (114aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HB71_9CAUL
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1299_curated_10
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9848..10336)
DNA (489bp) protein (163aa)
Phosphohistidine phosphatase SixA n=1 Tax=Caulobacter sp. AP07 RepID=J3AL03_9CAUL
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:EJL32774.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
sixA; phosphohistidine phosphatase; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
SCNpilot_cont_300_bf_scaffold_1299_curated_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10434..11597
DNA (1164bp) protein (388aa)
metX; homoserine O-acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31] rbh
Homoserine O-acetyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REB1_PHEZH rbh
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1299_curated_12
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11594..12259
DNA (666bp) protein (222aa)
methionine biosynthesis protein MetW rbh
Methionine biosynthesis protein MetW n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VE98_CAUST rbh
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:ADG08921.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1299_curated_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12269..13003
DNA (735bp) protein (245aa)
endonuclease/exonuclease/phosphatase; K06896 rbh
Endonuclease/exonuclease/phosphatase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T5G2_CAUSK rbh
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ABZ69520.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1299_curated_14
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13000..14562)
DNA (1563bp) protein (521aa)
phospholipase D/Transphosphatidylase rbh
Phospholipase D/Transphosphatidylase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VE96_CAUST rbh
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:ADG08919.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1299_curated_15
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14616..14960)
DNA (345bp) protein (115aa)
nitrogen regulatory protein P-II; K04752 nitrogen regulatory protein P-II 2
Nitrogen regulatory protein PII n=1 Tax=Caulobacter sp. AP07 RepID=J2GQZ6_9CAUL
Nitrogen regulatory protein PII {ECO:0000313|EMBL:EJL32780.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_cont_300_bf_scaffold_1299_curated_16
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15004..15378)
DNA (375bp) protein (125aa)
methyltransferase type 11
Methyltransferase type 11 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VE94_CAUST
Methyltransferase type 11 {ECO:0000313|EMBL:ADG08917.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1299_curated_17
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15787..16548
DNA (762bp) protein (254aa)
PREDICTED: hydroxyacylglutathione hydrolase 2, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14D01 rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] rbh
SCNpilot_cont_300_bf_scaffold_1299_curated_18
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16545..16979
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RSJ0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD84917.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
cupin; K09705 hypothetical protein
SCNpilot_cont_300_bf_scaffold_1299_curated_19
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16985..17704)
DNA (720bp) protein (240aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REA5_PHEZH
SCNpilot_cont_300_bf_scaffold_1299_curated_20
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17896..18621)
DNA (726bp) protein (242aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
phbB; acetoacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36] rbh
Acetoacetyl-CoA reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REA4_PHEZH rbh
SCNpilot_cont_300_bf_scaffold_1299_curated_21
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18664..19839)
DNA (1176bp) protein (392aa)
Acetyl-CoA acetyltransferase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AZ06_9CAUL rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAD59938.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
SCNpilot_cont_300_bf_scaffold_1299_curated_22
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20040..20651
DNA (612bp) protein (204aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Caulobacter sp. AP07 RepID=J3ASY5_9CAUL
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:EJL36744.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1299_curated_23
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20704..21060
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H1R5_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL36745.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1299_curated_24
unknown

Not on your lists

21219..21308
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1299_curated_25
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21310..21735)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3ASY8_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL36749.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1299_curated_26
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21801..22538)
DNA (738bp) protein (246aa)
Glycosyl transferase n=1 Tax=Caulobacter sp. AP07 RepID=J2H1R9_9CAUL rbh
Glycosyl transferase {ECO:0000313|EMBL:EJL36750.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
glycosyl transferase family protein rbh
SCNpilot_cont_300_bf_scaffold_1299_curated_27
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22622..24361
DNA (1740bp) protein (580aa)
family 39 glycosyl transferase rbh
Glycosyl transferase family 39 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHR4_CAUST rbh
Glycosyl transferase family 39 {ECO:0000313|EMBL:ADG09045.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1299_curated_28
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24358..25263
DNA (906bp) protein (302aa)
Isopropylmalate/homocitrate/citramalate synthase n=1 Tax=Caulobacter sp. AP07 RepID=J2Q9L9_9CAUL rbh
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:EJL36752.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] rbh
Displaying items 1-30 of 36 in total

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