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SCNpilot_cont_300_bf_scaffold_2498_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2498_curated_1
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1..2481
DNA (2481bp) protein (827aa)
membrane-bound dehydrogenase domain protein
Membrane-bound dehydrogenase domain protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K2B4_9BACT
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:CCG98267.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_cont_300_bf_scaffold_2498_curated_2
unknown

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comp(2735..4882)
DNA (2148bp) protein (716aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2498_curated_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5398..5613
DNA (216bp) protein (72aa)
Coagulation factor 5/8 type domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5Z3_9BACT
Coagulation factor 5/8 type domain protein {ECO:0000313|EMBL:EDY18196.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCNpilot_cont_300_bf_scaffold_2498_curated_4
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5670..6407)
DNA (738bp) protein (246aa)
acetyltransferase (EC:2.3.1.-)
Acetyltransferase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GY50_CAUCN
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADG11308.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2498_curated_5
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6488..6691)
DNA (204bp) protein (68aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Cold-shock protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4NFU2_9CAUL
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_300_bf_scaffold_2498_curated_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6927..7370)
DNA (444bp) protein (148aa)
redoxin domain-containing protein
Redoxin domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T2T6_CAUSK
Redoxin domain protein {ECO:0000313|EMBL:ABZ72337.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2498_curated_7
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7498..8922
DNA (1425bp) protein (475aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] rbh
Argininosuccinate lyase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VLD7_CAUST rbh
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Myc
SCNpilot_cont_300_bf_scaffold_2498_curated_8
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8919..9245
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HBQ7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL32988.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2498_curated_9
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9256..10533
DNA (1278bp) protein (426aa)
lysA; diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Diaminopimelate decarboxylase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GY54_CAUCN rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2498_curated_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10521..11441
DNA (921bp) protein (307aa)
16S RNA G1207 methylase RsmC n=1 Tax=Microvirga sp. WSM3557 RepID=I4YSP3_9RHIZ rbh
16S RNA G1207 methylase RsmC {ECO:0000313|EMBL:EIM26985.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
methyltransferase small; K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] rbh
SCNpilot_cont_300_bf_scaffold_2498_curated_11
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11438..12163
DNA (726bp) protein (242aa)
pseudouridine synthase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034A8995 rbh
pseudouridine synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_cont_300_bf_scaffold_2498_curated_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12160..12684)
DNA (525bp) protein (175aa)
hpt; hypoxanthine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine phosphoribosyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFG5_PHEZH
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ACG77046.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_2498_curated_13
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12692..13582)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EFK7_CAUCE rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ80829.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_2498_curated_14
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13637..14335
DNA (699bp) protein (233aa)
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein rbh
Cell division ATP-binding protein FtsE n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T2U3_CAUSK rbh
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:ABZ72344.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2498_curated_15
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14332..15219
DNA (888bp) protein (296aa)
hypothetical protein; K09811 cell division transport system permease protein rbh
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T2U4_CAUSK rbh
Uncharacterized protein {ECO:0000313|EMBL:ADG11317.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2498_curated_16
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15555..15830
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A5T7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL26424.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2498_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15827..16543
DNA (717bp) protein (239aa)
Acyltransferase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXP2_BREDI
Acyltransferase family protein {ECO:0000313|EMBL:EGF95740.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
SCNpilot_cont_300_bf_scaffold_2498_curated_18
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16544..17047)
DNA (504bp) protein (168aa)
lipocalin family protein
Lipocalin family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VEX7_CAUST
Lipocalin family protein {ECO:0000313|EMBL:ADG09395.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2498_curated_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17094..17636)
DNA (543bp) protein (181aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cation transport protein; K07232 cation transport protein ChaC
Cation transport protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF52_PHEZH
SCNpilot_cont_300_bf_scaffold_2498_curated_20
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17659..18654
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2G9I2_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL26430.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_2498_curated_21
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18727..19524
DNA (798bp) protein (266aa)
chorismate mutase rbh
Chorismate mutase, type II n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VLE8_CAUST rbh
Chorismate mutase, type II {ECO:0000313|EMBL:ADG11321.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2498_curated_22
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19536..20078
DNA (543bp) protein (181aa)
Histidinol-phosphate aminotransferase n=1 Tax=Caulobacter sp. AP07 RepID=J2PGL9_9CAUL
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
Displaying 22 items

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