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SCNpilot_cont_300_bf_scaffold_883_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_883_curated_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..227
DNA (225bp) protein (75aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T048_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ73538.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_883_curated_2
unknown

Not on your lists

224..508
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_883_curated_3
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(429..983)
DNA (555bp) protein (185aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHI9_CAUST
SCNpilot_cont_300_bf_scaffold_883_curated_4
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(980..1924)
DNA (945bp) protein (315aa)
homoserine kinase (EC:2.7.1.39); K02204 homoserine kinase type II [EC:2.7.1.39] rbh
Homoserine kinase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHJ0_CAUST rbh
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_883_curated_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1967..2926)
DNA (960bp) protein (320aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=ISPH_PHEZH rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000255|HAMAP-Rule:MF_00191}; EC=1.17.1.2 {ECO:0000255|HAMAP-Rule:MF_00191};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_883_curated_6
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3062..3763
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000377DF8D rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG08850.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_883_curated_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3760..5502
DNA (1743bp) protein (581aa)
arginyl-tRNA synthetase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000380AD7B rbh
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] rbh
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:MF_00123};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_883_curated_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5474..6481)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DDX2_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU75730.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
SCNpilot_cont_300_bf_scaffold_883_curated_9
unknown

Not on your lists

comp(6478..7539)
DNA (1062bp) protein (354aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_883_curated_10
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7988..9103
DNA (1116bp) protein (372aa)
glycine cleavage system T protein; K00605 aminomethyltransferase [EC:2.1.2.10] rbh
Aminomethyltransferase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T017_CAUSK rbh
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_883_curated_11
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9109..9396
DNA (288bp) protein (96aa)
glycine cleavage system h protein, putative
Glycine cleavage system H protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T016_CAUSK
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_883_curated_12
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9577..10893
DNA (1317bp) protein (439aa)
glycine dehydrogenase (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] rbh
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHJ7_CAUST rbh
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria;
SCNpilot_cont_300_bf_scaffold_883_curated_13
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10890..12458
DNA (1569bp) protein (523aa)
glycine dehydrogenase (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] rbh
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VHJ8_CAUST rbh
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caul
SCNpilot_cont_300_bf_scaffold_883_curated_14
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12578..13018
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4V2_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:AAK25313.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_883_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13236..13748)
DNA (513bp) protein (171aa)
ATP synthase subunit b n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAK3_BREDI
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
F0F1 ATP synthase subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
SCNpilot_cont_300_bf_scaffold_883_curated_16
unknown

Not on your lists

comp(13749..13865)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_883_curated_17
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13853..14305)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI000368CD5A
H+transporting two-sector ATPase B/B' subunit; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
SCNpilot_cont_300_bf_scaffold_883_curated_18
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14377..14601)
DNA (225bp) protein (75aa)
F0F1 ATP synthase subunit C n=1 Tax=alpha proteobacterium L41A RepID=UPI00035EB1F1
ATP synthase subunit C {ECO:0000313|EMBL:KIC58914.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
H+transporting two-sector ATPase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
SCNpilot_cont_300_bf_scaffold_883_curated_19
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14648..15439)
DNA (792bp) protein (264aa)
F0F1 ATP synthase subunit A n=1 Tax=alpha proteobacterium L41A RepID=UPI0003784FAC rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
ATP synthase F0 subunit alpha; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] rbh
SCNpilot_cont_300_bf_scaffold_883_curated_20
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15445..15801)
DNA (357bp) protein (119aa)
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
ATP synthase protein I n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QE84_9ACTO
putative ATP synthase protein I; K02116 ATP synthase protein I
SCNpilot_cont_300_bf_scaffold_883_curated_21
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15987..16805)
DNA (819bp) protein (273aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
Membrane protein n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CJ49_XANCA
SCNpilot_cont_300_bf_scaffold_883_curated_22
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17126..17479
DNA (354bp) protein (118aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCP3_PHEZH
SCNpilot_cont_300_bf_scaffold_883_curated_23
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17543..20983)
DNA (3441bp) protein (1147aa)
chromosome segregation protein SMC; K03529 chromosome segregation protein rbh
Chromosome partition protein Smc n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T003_CAUSK rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_883_curated_24
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21000..21626)
DNA (627bp) protein (209aa)
Protein-disulfide isomerase n=1 Tax=Caulobacter sp. AP07 RepID=J2PXL9_9CAUL
Protein-disulfide isomerase {ECO:0000313|EMBL:EJL32517.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_883_curated_25
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21741..22364)
DNA (624bp) protein (208aa)
Protein-disulfide isomerase n=1 Tax=Caulobacter sp. AP07 RepID=J2PXL9_9CAUL
Protein-disulfide isomerase {ECO:0000313|EMBL:EJL32517.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_883_curated_26
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22448..22993)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D3W1_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83301.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_883_curated_27
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23015..24100
DNA (1086bp) protein (362aa)
mutY; A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] rbh
A/G-specific adenine glycosylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF04_PHEZH rbh
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ACG76992.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_883_curated_28
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24103..24999)
DNA (897bp) protein (299aa)
hypothetical protein rbh
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8Z6_PHEZH rbh
Uncharacterized protein {ECO:0000313|EMBL:ACG79361.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_883_curated_29
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25095..26177)
DNA (1083bp) protein (361aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
DNA methylase N-4/N-6 domain-containing protein; K13581 modification methylase [EC:2.1.1.72] rbh
DNA methylase N-4/N-6 domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZF8_CAUSK rbh
SCNpilot_cont_300_bf_scaffold_883_curated_30
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26265..26927)
DNA (663bp) protein (221aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] rbh
Ribonuclease HII n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF02_PHEZH rbh
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Displaying items 1-30 of 40 in total

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