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SCNpilot_cont_300_bf_scaffold_5635_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5635_curated_1
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..751
DNA (750bp) protein (250aa)
ferrous iron transporter B; K04759 ferrous iron transport protein B rbh
Ferrous iron transport protein B n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QGI4_BRESC rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:ADL00800.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_300_bf_scaffold_5635_curated_2
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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818..1786
DNA (969bp) protein (323aa)
Cation diffusion facilitator family transporter n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WT56_9RHIZ rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EIZ83558.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
cobalt-zinc-cadmium resistance protein CzcD rbh
SCNpilot_cont_300_bf_scaffold_5635_curated_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1768..1986)
DNA (219bp) protein (73aa)
hypothetical protein; K15383 MtN3 and saliva related transmembrane protein
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REH2_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:ACG76914.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_5635_curated_4
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2038..2514)
DNA (477bp) protein (159aa)
response regulator n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00036339FE
Response regulator of citrate/malate metabolism {ECO:0000313|EMBL:EJL25335.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
response regulator
SCNpilot_cont_300_bf_scaffold_5635_curated_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2511..3173)
DNA (663bp) protein (221aa)
lovK; sensory box histidine kinase
Photosensory histidine protein kinase LovK n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GYF7_CAUCN
LOV histidine kinase LovK {ECO:0000313|EMBL:AAK22272.2}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_5635_curated_6
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(3220..3354)
DNA (135bp) protein (45aa)
sbp; sulfate ABC transporter substrate-binding protein; K02048 sulfate transport system substrate-binding protein
ABC-type sulfate transport system substrate-binding protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SVY0_JANMA
Uncharacterized protein {ECO:0000313|EMBL:ADH65129.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
SCNpilot_cont_300_bf_scaffold_5635_curated_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4307..7420)
DNA (3114bp) protein (1038aa)
Uncharacterized protein {ECO:0000313|EMBL:EJL34800.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GWG8_9CAUL rbh
autotransporter beta-domain-containing protein rbh
SCNpilot_cont_300_bf_scaffold_5635_curated_8
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7653..8888
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D4K3_CAUCE rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
histidine kinase; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] rbh
SCNpilot_cont_300_bf_scaffold_5635_curated_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9005..9697
DNA (693bp) protein (231aa)
phosphate uptake regulator PhoU; K02039 phosphate transport system protein rbh
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T119_CAUSK rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_5635_curated_10
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9694..10395
DNA (702bp) protein (234aa)
PREDICTED: uncharacterized protein LOC102338223 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C116D2 rbh
winged helix family two component transcriptional regulator; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADG12282.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_5635_curated_11
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10447..11361
DNA (915bp) protein (305aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] rbh
Phosphoribosylamine--glycine ligase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VP55_CAUST rbh
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 1
Displaying 11 items

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