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SCNpilot_cont_300_bf_scaffold_2452_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2452_curated_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..154
DNA (153bp) protein (51aa)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Caulobacter sp. AP07 RepID=J2H4R3_9CAUL
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
methionine-R-sulfoxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
SCNpilot_cont_300_bf_scaffold_2452_curated_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(286..1233)
DNA (948bp) protein (316aa)
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4J5_CAUCN
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000313|EMBL:AAK23290.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2452_curated_3
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1301..1531
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC55764.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QIC8_BREDI
hypothetical protein; K06938
SCNpilot_cont_300_bf_scaffold_2452_curated_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1628..2146
DNA (519bp) protein (173aa)
Clan AA aspartic protease, TIGR02281 family n=1 Tax=Caulobacter crescentus OR37 RepID=R0EHR7_CAUCE
Clan AA aspartic protease, TIGR02281 family {ECO:0000313|EMBL:ENZ81574.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
perP; aspartyl protease PerP; K06985 aspartyl protease family protein
SCNpilot_cont_300_bf_scaffold_2452_curated_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2183..2560
DNA (378bp) protein (126aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T366_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ69301.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2452_curated_6
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2592..3548)
DNA (957bp) protein (319aa)
YjbN family TIM-barrel protein; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] rbh
tRNA-dihydrouridine synthase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VIZ1_CAUST rbh
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2452_curated_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4021..5037)
DNA (1017bp) protein (339aa)
copper resistance B; K07233 copper resistance protein B rbh
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HQ15_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL37938.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_cont_300_bf_scaffold_2452_curated_8
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5034..6743)
DNA (1710bp) protein (570aa)
CopA family copper resistance protein
Copper-resistance protein, CopA family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV10_CAUSK
Copper-resistance protein, CopA family {ECO:0000313|EMBL:ABZ71479.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2452_curated_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6902..7252
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H519_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL37940.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
copper resistance protein CopC; K07156
SCNpilot_cont_300_bf_scaffold_2452_curated_10
unknown

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comp(7395..7817)
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2452_curated_11
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8177..8470
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AV16_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL37949.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2452_curated_12
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8467..8907
DNA (441bp) protein (147aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SUX2_CAUSK
SCNpilot_cont_300_bf_scaffold_2452_curated_13
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8904..9485
DNA (582bp) protein (194aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Caulobacter sp. AP07 RepID=J3AU51_9CAUL
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL37951.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_cont_300_bf_scaffold_2452_curated_14
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9508..9912)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00035D10CE
MerR family transcriptional regulator {ECO:0000313|EMBL:AJR25158.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
MerR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2452_curated_15
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9982..10734
DNA (753bp) protein (251aa)
DNA, contig: SP668 {ECO:0000313|EMBL:GAN15831.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI0003744B99 rbh
glutaredoxin rbh
SCNpilot_cont_300_bf_scaffold_2452_curated_16
unknown

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comp(10771..10968)
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 16 items

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