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SCNpilot_cont_300_bf_scaffold_2775_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2775_curated_1
unknown

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3..146
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2775_curated_2
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(331..543)
DNA (213bp) protein (71aa)
Prolyl endopeptidase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1E6_9PROT
Prolyl endopeptidase {ECO:0000313|EMBL:EGY00659.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
prolyl endopeptidase (EC:3.4.21.26)
SCNpilot_cont_300_bf_scaffold_2775_curated_3
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(543..2435)
DNA (1893bp) protein (631aa)
prolyl endopeptidase (EC:3.4.21.26) rbh
Prolyl endopeptidase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QM69_9CYAN rbh
Prolyl endopeptidase {ECO:0000313|EMBL:AGY59968.1}; EC=3.4.21.26 {ECO:0000313|EMBL:AGY59968.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
SCNpilot_cont_300_bf_scaffold_2775_curated_4
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2576..3985)
DNA (1410bp) protein (470aa)
glutamine synthetase, type I; K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamine synthetase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VH01_CAUST rbh
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_2775_curated_5
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4028..4366)
DNA (339bp) protein (113aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
PREDICTED: nitrogen regulatory protein P-II-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C0FEE6
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1
SCNpilot_cont_300_bf_scaffold_2775_curated_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4745..6232
DNA (1488bp) protein (496aa)
YjeF-like protein, hydroxyethylthiazole kinase-related protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D5G1_CAUCE rbh
YjeF-like protein, hydroxyethylthiazole kinase-related protein {ECO:0000313|EMBL:ENZ83615.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
carbohydrate kinase rbh
SCNpilot_cont_300_bf_scaffold_2775_curated_7
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6229..6885)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037A0DA2 rbh
Maleylacetoacetate isomerase {ECO:0000313|EMBL:EPX56364.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
glutathione S-transferase domain-containing protein; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
SCNpilot_cont_300_bf_scaffold_2775_curated_8
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6971..7471
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003694779
HxlR family transcriptional regulator
HxlR family transcriptional regulator {ECO:0000313|EMBL:AFE06040.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
SCNpilot_cont_300_bf_scaffold_2775_curated_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7468..7899)
DNA (432bp) protein (144aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z4K3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM31145.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2775_curated_10
unknown

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8343..8504
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2775_curated_11
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8537..8851
DNA (315bp) protein (105aa)
PhnA-like protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489BFA
PhnA-like protein {ECO:0000313|EMBL:EZP49258.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
PhnA-like protein
SCNpilot_cont_300_bf_scaffold_2775_curated_trna_1
unknown

Not on your lists

8903..8984
DNA (82bp)
transferRNA
SCNpilot_cont_300_bf_scaffold_2775_curated_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9137..9430
DNA (294bp) protein (98aa)
Trigger factor n=1 Tax=Caulobacter crescentus OR37 RepID=R0ERJ3_CAUCE
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
tig; trigger factor; K03545 trigger factor
Displaying 13 items

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