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SCNpilot_cont_300_bf_scaffold_2428_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2428_curated_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..205
DNA (204bp) protein (68aa)
membrane protein n=3 Tax=Caulobacter RepID=UPI0003783390
Outer membrane protein/peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EJL26309.1}; Flags: Fragment;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
OmpA/MotB domain-containing protein
SCNpilot_cont_300_bf_scaffold_2428_curated_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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410..3466
DNA (3057bp) protein (1019aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase ,L-proline dehydrogenase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EGW4_CAUCE rbh
Delta-1-pyrroline-5-carboxylate dehydrogenase ,L-proline dehydrogenase {ECO:0000313|EMBL:ENZ80502.1}; EC=1.2.1.88 {ECO:0000313|EMBL:ENZ80502.1};; EC=1.5.5.2 {ECO:0000313|EMBL:ENZ80502.1};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] rbh
SCNpilot_cont_300_bf_scaffold_2428_curated_3
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3593..4309)
DNA (717bp) protein (239aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QIX6_BRESC
SCNpilot_cont_300_bf_scaffold_2428_curated_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4609..6492
DNA (1884bp) protein (628aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EQT0_CAUCE rbh
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] rbh
SCNpilot_cont_300_bf_scaffold_2428_curated_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6698..7675
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D434_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83381.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2428_curated_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7910..8455)
DNA (546bp) protein (182aa)
glutathione S-transferase; K11208 GST-like protein
Glutathione S-transferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDQ8_PHEZH
Glutathione S-transferase {ECO:0000313|EMBL:ACG76757.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_2428_curated_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8600..9643
DNA (1044bp) protein (348aa)
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] rbh
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T307_CAUSK rbh
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2428_curated_8
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9647..10408
DNA (762bp) protein (254aa)
Putative dehydrogenase n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EU70_STRRM rbh
Putative dehydrogenase {ECO:0000313|EMBL:ELQ83071.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_300_bf_scaffold_2428_curated_9
unknown

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11273..12166
DNA (894bp) protein (298aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2428_curated_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12193..13440)
DNA (1248bp) protein (416aa)
Na+/H+-dicarboxylate symporter rbh
Na+/H+-dicarboxylate symporter n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDR7_PHEZH rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCNpilot_cont_300_bf_scaffold_2428_curated_11
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13582..14949)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Klebsiella variicola CAG:634 RepID=R5X720_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDA00337.1}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples.;" source="Klebsiella variicola CAG:634.;"
SCNpilot_cont_300_bf_scaffold_2428_curated_12
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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15054..15281
DNA (228bp) protein (76aa)
para-aminobenzoate synthase component I (EC:4.1.3.27); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85]
Para-aminobenzoate synthase component I n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VN09_CAUST
Para-aminobenzoate synthase component I {ECO:0000313|EMBL:ADG11882.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ADG11882.1};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
Displaying 12 items

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