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SCNpilot_cont_300_bf_scaffold_3351_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3351_curated_1
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..220
DNA (219bp) protein (73aa)
WD40-like repeat containing protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GBI4_9CAUL
WD40-like repeat containing protein {ECO:0000313|EMBL:EJL27175.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
YfgL-family outer membrane assembly lipoprotein
SCNpilot_cont_300_bf_scaffold_3351_curated_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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273..1823
DNA (1551bp) protein (517aa)
GTPase Der n=1 Tax=Caulobacter crescentus OR37 RepID=R0ERA7_CAUCE rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|SAAS:SAAS00038180}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
engA; GTP-binding protein EngA; K03977 GTP-binding protein rbh
SCNpilot_cont_300_bf_scaffold_3351_curated_3
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1780..2565)
DNA (786bp) protein (262aa)
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VH62_CAUST rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADG10780.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_3351_curated_4
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2575..3576)
DNA (1002bp) protein (334aa)
bile acid:sodium symporter; K14347 solute carrier family 10 (sodium/bile acid cotransporter), member 7 rbh
Bile acid:sodium symporter n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWK0_CAUSK rbh
Bile acid:sodium symporter {ECO:0000313|EMBL:ABZ71628.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3351_curated_5
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3573..5069)
DNA (1497bp) protein (499aa)
Amidophosphoribosyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J2GBH9_9CAUL rbh
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobac
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] rbh
SCNpilot_cont_300_bf_scaffold_3351_curated_6
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5066..5665)
DNA (600bp) protein (200aa)
Putative membrane protein, required for colicin V production n=1 Tax=Caulobacter sp. AP07 RepID=J3A7R4_9CAUL
Putative membrane protein, required for colicin V production {ECO:0000313|EMBL:EJL27169.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
colicin V production protein; K03558 membrane protein required for colicin V production
SCNpilot_cont_300_bf_scaffold_3351_curated_7
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6446..7393
DNA (948bp) protein (316aa)
ABC transporter ATP-binding protein rbh
ABC transporter ATP-binding protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H2W1_CAUCN rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AAK22982.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_3351_curated_8
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7604..9775
DNA (2172bp) protein (724aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000366728F
Uncharacterized protein {ECO:0000313|EMBL:GAO39034.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
peptidase M10A and M12B matrixin and adamalysin
SCNpilot_cont_300_bf_scaffold_3351_curated_9
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9965..10648)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D347_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83051.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3351_curated_10
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10796..12109)
DNA (1314bp) protein (438aa)
DNA repair protein RadA (EC:2.1.1.63); K04485 DNA repair protein RadA/Sms rbh
DNA repair protein radA n=1 Tax=Caulobacter sp. AP07 RepID=J2GW86_9CAUL rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
SCNpilot_cont_300_bf_scaffold_3351_curated_11
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12137..12478)
DNA (342bp) protein (114aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWK5_CAUSK
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
Displaying 11 items

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