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SCNpilot_cont_300_bf_scaffold_3111_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3111_curated_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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73..1128
DNA (1056bp) protein (352aa)
conserved protein of unknown function; xylose isomerase-like domain rbh
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXS8_AZOBR rbh
Uncharacterized protein {ECO:0000313|EMBL:CCD02687.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_cont_300_bf_scaffold_3111_curated_2
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1357..1827)
DNA (471bp) protein (157aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Caulobacter sp. AP07 RepID=J3AAB1_9CAUL
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
FKBP-type peptidylprolyl isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
SCNpilot_cont_300_bf_scaffold_3111_curated_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1897..3210)
DNA (1314bp) protein (438aa)
Glucose/galactose transporter {ECO:0000313|EMBL:KFC67982.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
glucose transporter n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287CA43 rbh
glucose/galactose transporter rbh
SCNpilot_cont_300_bf_scaffold_3111_curated_4
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3308..4087)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003778DDF
Transcriptional regulator IclR {ECO:0000313|EMBL:GAN79585.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
pcaR; transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein
SCNpilot_cont_300_bf_scaffold_3111_curated_5
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4157..5329)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E513EB rbh
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2); K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] rbh
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:ADG10807.1}; EC=1.14.13.2 {ECO:0000313|EMBL:ADG10807.1};; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_3111_curated_6
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5419..6312
DNA (894bp) protein (298aa)
AraC family transcriptional regulator
Transcriptional regulator, AraC family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UR36_METS4
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACA20488.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_300_bf_scaffold_3111_curated_7
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6394..7542
DNA (1149bp) protein (383aa)
Major facilitator superfamily (MFS_1) transporter n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WH27_9BURK rbh
Major facilitator superfamily (MFS_1) transporter {ECO:0000313|EMBL:EAY71273.1}; Sugar (And other) transporter family protein {ECO:0000313|EMBL:AJY10853.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
3-hydroxyphenylpropionic transporter MhpT; K05819 MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter rbh
SCNpilot_cont_300_bf_scaffold_3111_curated_8
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7681..8679)
DNA (999bp) protein (333aa)
oxidoreductase FAD/NAD(P)-binding subunit; K03863 vanillate monooxygenase [EC:1.14.13.82] rbh
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXU6_CAUSK rbh
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ABZ70269.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3111_curated_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8689..9414)
DNA (726bp) protein (242aa)
GntR family transcriptional regulator; K11475 GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Transcriptional regulator, GntR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXU5_CAUSK
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABZ70268.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3111_curated_10
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9417..10469)
DNA (1053bp) protein (351aa)
Rieske (2Fe-2S) protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00037EF42C rbh
vanillate monooxygenase (EC:1.14.13.82); K03862 vanillate monooxygenase [EC:1.14.13.82] rbh
Vanillate monooxygenase {ECO:0000313|EMBL:ABZ70267.1}; EC=1.14.13.82 {ECO:0000313|EMBL:ABZ70267.1};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3111_curated_11
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10626..11552
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PSJ3_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL30672.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_3111_curated_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11549..12778)
DNA (1230bp) protein (410aa)
hypothetical protein rbh
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9A857_CAUCR rbh
Uncharacterized protein {ECO:0000313|EMBL:AAK23486.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_3111_curated_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12831..13103)
DNA (273bp) protein (91aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-dependent synthetase and ligase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXU2_CAUSK
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABZ70265.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3111_curated_14
unknown

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13444..14169
DNA (726bp) protein (242aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3111_curated_15
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14447..14932)
DNA (486bp) protein (162aa)
MarR family transcriptional regulator
Transcriptional regulator, MarR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXU1_CAUSK
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABZ70264.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_3111_curated_16
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15122..16222
DNA (1101bp) protein (367aa)
aldehyde dehydrogenase rbh
Aldehyde dehydrogenase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXU0_CAUSK rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABZ70263.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
Displaying 16 items

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