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SCNpilot_cont_300_bf_scaffold_1730_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1730_curated_1
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1065)
DNA (1065bp) protein (355aa)
alkyl hydroperoxide reductase; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJU4_CAUST
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADG10623.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_2
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1151..1999
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4P8U7_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81650.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
neurolysin (EC:3.4.24.16); K01392 thimet oligopeptidase [EC:3.4.24.15]
SCNpilot_cont_300_bf_scaffold_1730_curated_3
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1989..3125
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4NC78_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ79532.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE204.;"
tetraacyldisaccharide-1-P 4'-kinase (EC:3.4.24.15); K01392 thimet oligopeptidase [EC:3.4.24.15] rbh
SCNpilot_cont_300_bf_scaffold_1730_curated_4
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3268..4524)
DNA (1257bp) protein (419aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
tyrosyl-tRNA synthetase n=1 Tax=alpha proteobacterium L41A RepID=UPI00035FA246 rbh
tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] rbh
SCNpilot_cont_300_bf_scaffold_1730_curated_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4584..5678
DNA (1095bp) protein (365aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] rbh
Anhydro-N-acetylmuramic acid kinase n=3 Tax=Caulobacter crescentus RepID=ANMK_CAUCR rbh
Anhydro-N-acetylmuramic acid kinase {ECO:0000255|HAMAP-Rule:MF_01270}; EC=2.7.1.170 {ECO:0000255|HAMAP-Rule:MF_01270};; AnhMurNAc kinase {ECO:0000255|HAMAP-Rule:MF_01270}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_6
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5738..6292
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D113_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ82145.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1730_curated_7
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6424..7074)
DNA (651bp) protein (217aa)
Putative hydrolase of the alpha/beta superfamily n=1 Tax=Caulobacter sp. AP07 RepID=J3AII6_9CAUL rbh
Putative hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:EJL32376.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein; K07018 rbh
SCNpilot_cont_300_bf_scaffold_1730_curated_8
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7231..7698
DNA (468bp) protein (156aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Caulobacter crescentus OR37 RepID=R0EE94_CAUCE
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ENZ83713.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
SCNpilot_cont_300_bf_scaffold_1730_curated_9
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7695..8819
DNA (1125bp) protein (375aa)
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] rbh
Aminotransferase class V n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXC9_CAUSK rbh
Aminotransferase class V {ECO:0000313|EMBL:ABZ71714.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_10
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8820..10298
DNA (1479bp) protein (493aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB rbh
ABC transporter-associated protein sufB n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GWL3_CAUCN rbh
SCNpilot_cont_300_bf_scaffold_1730_curated_11
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10295..10753
DNA (459bp) protein (153aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VIL8_CAUST
Uncharacterized protein {ECO:0000313|EMBL:ADG09834.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_12
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10747..11499
DNA (753bp) protein (251aa)
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein rbh
FeS assembly ATPase SufC n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXD3_CAUSK rbh
FeS assembly ATPase SufC {ECO:0000313|EMBL:ABZ71718.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11496..12527
DNA (1032bp) protein (344aa)
SufBD protein; K09015 Fe-S cluster assembly protein SufD rbh
SufBD protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXD4_CAUSK rbh
SufBD protein {ECO:0000313|EMBL:ABZ71719.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_14
unknown

Not on your lists

comp(12733..12954)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1730_curated_15
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13024..13728
DNA (705bp) protein (235aa)
SufS subfamily cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] rbh
Cysteine desulfurase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EPI4_CAUCE rbh
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
SCNpilot_cont_300_bf_scaffold_1730_curated_16
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14137..14448
DNA (312bp) protein (104aa)
HesB protein family; K13628 iron-sulfur cluster assembly protein
HesB protein family n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=B8GWK7_CAUCN
HesB/YadR/YfhF family protein {ECO:0000313|EMBL:AAK23833.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_17
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14483..15487
DNA (1005bp) protein (335aa)
ADP-heptose:LPS heptosyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J2HA27_9CAUL rbh
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:EJL32363.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
glycosyl transferase family protein rbh
SCNpilot_cont_300_bf_scaffold_1730_curated_18
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15487..15870
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D5A5_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83726.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1730_curated_19
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16022..17077)
DNA (1056bp) protein (352aa)
GGDEF family protein; K13590 diguanylate cyclase rbh
GGDEF diguanylate cyclase DgcB n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GWJ9_CAUCN rbh
GGDEF family protein {ECO:0000313|EMBL:AAK23825.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_20
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17187..18818)
DNA (1632bp) protein (544aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
DNA/RNA helicase, superfamily II n=1 Tax=Caulobacter crescentus OR37 RepID=R0D5A8_CAUCE rbh
DEAD/DEAH box helicase rbh
SCNpilot_cont_300_bf_scaffold_1730_curated_21
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18999..19340
DNA (342bp) protein (114aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QGB5_BRESC
Uncharacterized protein {ECO:0000313|EMBL:ADL00731.1}; Flags: Precursor;; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19410..21650
DNA (2241bp) protein (747aa)
dipeptidyl peptidase IV; K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5] rbh
Dipeptidyl peptidase IV n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH88_PHEZH rbh
Dipeptidyl peptidase IV {ECO:0000313|EMBL:ACG79036.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_23
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21785..23830)
DNA (2046bp) protein (682aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
DNA topoisomerase 4 subunit B n=1 Tax=Caulobacter crescentus OR37 RepID=R0EDU5_CAUCE rbh
parE; DNA topoisomerase IV subunit B; K02622 topoisomerase IV subunit B [EC:5.99.1.-] rbh
SCNpilot_cont_300_bf_scaffold_1730_curated_24
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23946..24314
DNA (369bp) protein (123aa)
Kazal domain-containing protein {ECO:0000313|EMBL:KDA00397.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
Kazal-type serine protease inhibitor family protein n=1 Tax=Caulobacter sp. AP07 RepID=J2FVB5_9CAUL
Kazal domain-containing protein
SCNpilot_cont_300_bf_scaffold_1730_curated_25
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24303..24920)
DNA (618bp) protein (206aa)
Lysine transporter LysE n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H2I6_PSEAC
Lysine transporter LysE {ECO:0000313|EMBL:EQM65997.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
lysine exporter protein LysE/YggA
SCNpilot_cont_300_bf_scaffold_1730_curated_26
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25257..25985
DNA (729bp) protein (243aa)
PAS domain S-box protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7Y0_9BRAD
PAS domain S-box protein {ECO:0000313|EMBL:ERF80848.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative PAS/PAC sensor protein
SCNpilot_cont_300_bf_scaffold_1730_curated_27
unknown

Not on your lists

26173..26424
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1730_curated_28
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26421..26804
DNA (384bp) protein (128aa)
hipB; HTH transcriptional regulator
HTH transcriptional regulator n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GX06_CAUCN
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:AAK22039.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_29
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26810..27451)
DNA (642bp) protein (214aa)
HAD family hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWI7_CAUSK
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ABZ71615.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1730_curated_30
unknown

Not on your lists

28606..29685
DNA (1080bp) protein (360aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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