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SCNpilot_cont_300_bf_scaffold_2037_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2037_curated_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..279)
DNA (279bp) protein (93aa)
Alpha,alpha-trehalose-phosphate synthase; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Alpha,alpha-trehalose-phosphate synthase {ECO:0000313|EMBL:KIZ45101.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217D6_RHOPB
SCNpilot_cont_300_bf_scaffold_2037_curated_2
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(276..2093)
DNA (1818bp) protein (606aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
Glycosyl hydrolase, family 15 n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W647_9CAUL rbh
glycoside hydrolase 15-like protein rbh
SCNpilot_cont_300_bf_scaffold_2037_curated_3
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2095..2886)
DNA (792bp) protein (264aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Trehalose 6-phosphatase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EPH3_CAUCE
HAD superfamily hydrolase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
SCNpilot_cont_300_bf_scaffold_2037_curated_4
unknown

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3329..3511
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2037_curated_5
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3421..3768)
DNA (348bp) protein (116aa)
Citrate transporter superfamily n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WAN7_9CAUL
Citrate transporter superfamily {ECO:0000313|EMBL:EDX79686.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
citrate transporter
SCNpilot_cont_300_bf_scaffold_2037_curated_6
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3765..4265)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037CBAC0
Citrate transporter superfamily {ECO:0000313|EMBL:EDX79686.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
citrate transporter
SCNpilot_cont_300_bf_scaffold_2037_curated_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4785..5513)
DNA (729bp) protein (243aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
CRP/FNR family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T045_CAUSK
SCNpilot_cont_300_bf_scaffold_2037_curated_8
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6114..6437)
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KHL58422.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
hypothetical protein n=2 Tax=Xanthomonas RepID=UPI0001CBF112
Hypothetical Protein
SCNpilot_cont_300_bf_scaffold_2037_curated_9
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6434..7207)
DNA (774bp) protein (258aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:KFL26132.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Exodeoxyribonuclease III n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TNF3_9RHIZ rbh
exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
SCNpilot_cont_300_bf_scaffold_2037_curated_10
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

7260..7445
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE87527.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R91_SOLUE
SCNpilot_cont_300_bf_scaffold_2037_curated_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7442..8542)
DNA (1101bp) protein (367aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
DNA polymerase IV n=1 Tax=Sphingomonas sp. LH128 RepID=J8VNZ3_9SPHN rbh
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] rbh
SCNpilot_cont_300_bf_scaffold_2037_curated_12
unknown

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comp(8598..9065)
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2037_curated_13
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9184..9441
DNA (258bp) protein (86aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S665_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AGH51525.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_300_bf_scaffold_2037_curated_14
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9760..11283
DNA (1524bp) protein (508aa)
Nucleotidyltransferase {ECO:0000313|EMBL:KIC53942.1}; Flags: Fragment;; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
putative nucleotidyltransferase rbh
Putative nucleotidyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S705_9SPHN rbh
SCNpilot_cont_300_bf_scaffold_2037_curated_15
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11944..15210
DNA (3267bp) protein (1089aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] rbh
Error-prone DNA polymerase n=3 Tax=Sphingobium RepID=D4YY15_SPHJU rbh
SCNpilot_cont_300_bf_scaffold_2037_curated_16
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15429..15911)
DNA (483bp) protein (161aa)
MutT-like protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YRE4_9PSEU
MutT-like protein {ECO:0000313|EMBL:EME64540.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
MutT-like protein
SCNpilot_cont_300_bf_scaffold_2037_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16055..16240)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QE71_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY25877.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2037_curated_18
unknown

Not on your lists

16907..17638
DNA (732bp) protein (244aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2037_curated_19
unknown

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comp(18088..18315)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2037_curated_20
unknown

Not on your lists

comp(18395..18589)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2037_curated_21
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19038..19940)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002FFC678 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ67063.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_2037_curated_22
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19989..20678)
DNA (690bp) protein (230aa)
short-chain dehydrogenase/reductase SDR; K00034 glucose 1-dehydrogenase [EC:1.1.1.47]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V448_SPHWW
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABQ67064.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_2037_curated_23
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20892..21776)
DNA (885bp) protein (295aa)
Uncharacterized protein {ECO:0000313|EMBL:AHE55828.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZMB3_TERRK
SCNpilot_cont_300_bf_scaffold_2037_curated_24
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22329..22550)
DNA (222bp) protein (74aa)
General stress protein {ECO:0000313|EMBL:KKB84500.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
Putative general stress protein 26 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YDI8_9RHIZ
hypothetical protein
Displaying 24 items

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