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SCNpilot_cont_300_bf_scaffold_2031_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2031_curated_1
unknown

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comp(827..1264)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2031_curated_2
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1456..1656
DNA (201bp) protein (67aa)
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=RL35_CAUCN
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_2031_curated_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1672..2064
DNA (393bp) protein (131aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
50S ribosomal protein L20 n=1 Tax=Caulobacter crescentus OR37 RepID=R0E5F3_CAUCE
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
SCNpilot_cont_300_bf_scaffold_2031_curated_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2061..3134
DNA (1074bp) protein (358aa)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Caulobacter crescentus OR37 RepID=R0CLI8_CAUCE rbh
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] rbh
SCNpilot_cont_300_bf_scaffold_2031_curated_5
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3134..5521
DNA (2388bp) protein (796aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Caulobacter crescentus OR37 RepID=R0E3S9_CAUCE rbh
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] rbh
SCNpilot_cont_300_bf_scaffold_2031_curated_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5518..6171)
DNA (654bp) protein (218aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T9I7_CAUSK
Uncharacterized protein {ECO:0000313|EMBL:ABZ74362.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2031_curated_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6182..6769)
DNA (588bp) protein (196aa)
hypothetical protein rbh
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXY9_CAUSK rbh
Uncharacterized protein {ECO:0000313|EMBL:ABZ70312.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2031_curated_8
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6929..8734
DNA (1806bp) protein (602aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA rbh
Elongation factor 4 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SXY8_CAUSK rbh
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_2031_curated_9
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8777..9190
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:AJR22596.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4NYY1_9CAUL
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2031_curated_10
unknown

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comp(9324..9638)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2031_curated_11
unknown

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9753..9878
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2031_curated_12
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9914..10633
DNA (720bp) protein (240aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
Extensin-like protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZB25_9CAUL
Extensin family protein
SCNpilot_cont_300_bf_scaffold_2031_curated_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11010..11384)
DNA (375bp) protein (125aa)
hypothetical protein; K08995 putative membrane protein
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134Q2_RHOPS
Uncharacterized protein {ECO:0000313|EMBL:ABE40437.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Displaying 13 items

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