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SCNpilot_cont_300_bf_scaffold_1229_curated

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1229_curated_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


344..889
DNA (546bp) protein (182aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=1 Tax=Caulobacter sp. (strain K31) RepID=SYM_CAUSK
Methionine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000255|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00098}; Short=MetRS {ECO:0000255|HAMAP-Rule:MF_00098};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_2
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(886..2361)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQY6_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EIK91626.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_1229_curated_3
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2479..2715
DNA (237bp) protein (79aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VG49_CAUST
Uncharacterized protein {ECO:0000313|EMBL:ADG10052.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3042..3788
DNA (747bp) protein (249aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Phosphate binding protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HHF9_RHIRD rbh
pstS; phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1229_curated_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3812..4702
DNA (891bp) protein (297aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Phosphate transport system permease protein PstC n=2 Tax=Agrobacterium RepID=I6QN01_9RHIZ rbh
phosphate ABC transporter permease; K02037 phosphate transport system permease protein rbh
SCNpilot_cont_300_bf_scaffold_1229_curated_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4702..5643
DNA (942bp) protein (314aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HHG1_RHIRD rbh
phosphate ABC transporter permease; K02038 phosphate transport system permease protein rbh
SCNpilot_cont_300_bf_scaffold_1229_curated_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5695..6468
DNA (774bp) protein (258aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Phosphate import ATP-binding protein PstB n=2 Tax=Alcaligenes faecalis RepID=PSTB_ALCFA rbh
phosphate ABC transporter ATPase; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] rbh
SCNpilot_cont_300_bf_scaffold_1229_curated_8
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7816..8424)
DNA (609bp) protein (203aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QLY9_BRESC
SCNpilot_cont_300_bf_scaffold_1229_curated_9
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8538..9284
DNA (747bp) protein (249aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
transcriptional regulator rbh
Transcriptional regulator n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QLZ0_BRESC rbh
SCNpilot_cont_300_bf_scaffold_1229_curated_10
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9316..9723
DNA (408bp) protein (136aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V5W6_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:ABQ67682.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9713..10573)
DNA (861bp) protein (287aa)
Bacterial regulatory helix-turn-helix protein, lysR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2C5_BREDI
Bacterial regulatory helix-turn-helix protein, lysR family protein {ECO:0000313|EMBL:EGF95187.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1229_curated_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11243..11527
DNA (285bp) protein (95aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H227_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:AAK22843.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_13
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11524..12927)
DNA (1404bp) protein (468aa)
Uncharacterized protein {ECO:0000313|EMBL:AHE53442.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G9J7_9SPHN rbh
outer membrane efflux protein rbh
SCNpilot_cont_300_bf_scaffold_1229_curated_14
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12927..16127)
DNA (3201bp) protein (1067aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:ENZ83906.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Caulobacter crescentus OR37 RepID=R0D5R7_CAUCE rbh
hydrophobe/amphiphile efflux-1 (HAE1) family protein rbh
SCNpilot_cont_300_bf_scaffold_1229_curated_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16124..17305)
DNA (1182bp) protein (394aa)
Sphingomonas taxi strain 30a NODE_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29064.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
RND family efflux transporter, MFP subunit n=1 Tax=Caulobacter crescentus OR37 RepID=R0ESE7_CAUCE rbh
RND family efflux transporter MFP subunit rbh
SCNpilot_cont_300_bf_scaffold_1229_curated_16
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17590..18342
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037D05D6
Wenxma_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70817.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1229_curated_17
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18775..20151
DNA (1377bp) protein (459aa)
cell division protein Fic n=1 Tax=Methylocystis parvus RepID=UPI00035C90AF rbh
filamentation induced by camp protein fic rbh
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADU13736.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_18
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20256..20672)
DNA (417bp) protein (139aa)
arsC; arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9T5_PHEZH
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_19
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20669..21781)
DNA (1113bp) protein (371aa)
arsenite efflux pump protein; K03325 arsenite transporter, ACR3 family rbh
Arsenite efflux pump n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9T6_PHEZH rbh
Arsenite efflux pump {ECO:0000313|EMBL:ACG77850.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_20
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21778..21975)
DNA (198bp) protein (66aa)
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9T8_PHEZH
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACG77852.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_21
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22200..22859)
DNA (660bp) protein (220aa)
beta-lactamase
Beta-lactamase domain protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QF81_BRESC
Beta-lactamase domain protein {ECO:0000313|EMBL:ADL00566.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_22
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22925..23338)
DNA (414bp) protein (138aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Caulobacter sp. AP07 RepID=J2GWD7_9CAUL
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:EJL34765.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
OsmC family protein; K07397 putative redox protein
SCNpilot_cont_300_bf_scaffold_1229_curated_23
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23401..23892)
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP51347.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VVD3_9SPHN
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1229_curated_24
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23889..25121)
DNA (1233bp) protein (411aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO54197.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
sulfite dehydrogenase (cytochrome) subunit SorA apoprotein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EEFBE8 rbh
sulfite dehydrogenase (cytochrome) subunit SorA apoprotein (EC:1.8.2.1); K07147 rbh
SCNpilot_cont_300_bf_scaffold_1229_curated_25
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25147..26304)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000382020D rbh
C4-dicarboxylate transporter/malic acid transport protein rbh
C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:ADL00562.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_26
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26362..26859)
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP51353.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B66AC5
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1229_curated_27
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27010..27894)
DNA (885bp) protein (295aa)
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QF78_BRESC rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADL00563.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_28
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28029..28403
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289BEFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXS70709.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
SCNpilot_cont_300_bf_scaffold_1229_curated_29
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28400..29830
DNA (1431bp) protein (477aa)
hypothetical protein rbh
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LX87_METRJ rbh
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:ACB27208.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_300_bf_scaffold_1229_curated_30
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29959..30348
DNA (390bp) protein (130aa)
hypothetical protein; K07090
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFR8_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:ACG77149.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Displaying items 1-30 of 32 in total

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